hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-21483599/chunk_1/iprscan-20080501-21483599.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1258 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR02967 guan_deamin: guanine deaminase 808.6 1.2e-240 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR02967 1/1 51 469 .. 1 426 [] 808.6 1.2e-240 Alignments of top-scoring domains: TIGR02967: domain 1 of 1, from 51 to 469: score 808.6, E = 1.2e-240 *->leyfeDGLlvVen.GrIvavlPDkgdyaellkL.Kdtlpagveiedy +e+++D+Ll+V+++G+Iv++ +++++++kL K+++++++ei+++ KIAA1258 51 MEVLRDHLLGVSDsGKIVFL----EEASQQEKLaKEWCFKPCEIREL 93 rgkqLiiPGFIDTHiHYPQtemiAsSyGeqLLeWLekYTFPtEarFaDpa +++++++PG++DTHiH++Q+ +++sS++++LLeWL+kYTFP+E+rF++++ KIAA1258 94 SHHEFFMPGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNID 143 hAeevAefFldeLLrNGTTTAlVFgTVHpeSVdALFeaAekrgmRmIaGK +Aeev++++++++L+NGTTTA++F+T+H++S+++L+++++k+g+R+++GK KIAA1258 144 FAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVGK 193 VlMDlRN.APdyLrDTaesgydeSkaLIerWHgLkGn.RllYAVTPRFAP V+MDl++++P+y ++T+e++++e+++++ ++++ k+++R++++VTPRF++ KIAA1258 194 VCMDLNDtFPEY-KETTEESIKETERFVSEMLQ-KNYsRVKPIVTPRFSL 241 TSspEQLaaaGeLlkeyPDvyvQTHLSENkdEIaWVkeLFPeakdYLDVY ++s++++ ++G+++k++ D+++Q+H+SEN+dE+++Vk+L+P +k+Y++VY KIAA1258 242 SCSETLMGELGNIAKTR-DLHIQSHISENRDEVEAVKNLYPSYKNYTSVY 290 dhyGLLgrRsVfAHciHLsdeEcqrlaetGaAiAFCPTSNLFLGSGlFdL d+++LL++++V+AH+++Ls eE+++++e+Ga+iA+CP+SNL L+SG++++ KIAA1258 291 DKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNV 340 kkavlehgvrVGLGTDvGGGTSFSmLqTlneAYKvsqlqEGDPnernkvn ++ l+h+v++GLGTDv+GG+S+SmL+++++A++vs+++ ++nkvn KIAA1258 341 LEV-LKHEVKIGLGTDVAGGYSYSMLDAIRRAVMVSNIL-----LINKVN 384 GarLspfeaFYLATlGGArALdLddrIGnfepGkeADfvVLDpaAtplla +++L+ e+F+LATlGG++AL+Ld++IGnfe+Gke+D+++++p+A +++ KIAA1258 385 EKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDSPI 434 lRmeg.f.aetLedkLFaLmtLGDDRavaeTYvaG<-* + ++g+f ++ e++++++ +LGDDR+++e+Yv+G KIAA1258 435 DLFYGdFfGDISEAVIQKFLYLGDDRNIEEVYVGG 469 //