hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22280602/chunk_1/iprscan-20080501-22280602.nocrc
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Query sequence: KIAA1282
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00100                                                  69.0    5.8e-16   1
SM00086                                                  34.6    1.4e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00086    1/1     128   170 ..     1    43 []    34.6  1.4e-05
SM00100    1/1     616   731 ..     1   123 []    69.0  5.8e-16

Alignments of top-scoring domains:
SM00086: domain 1 of 1, from 128 to 170: score 34.6, E = 1.4e-05
                   *->tveyrlrrkdGsliwvlvsaspirdedgevegilgvvrDITer<-*
                      + e++l+rk G ++w+l+ + pi +e+gev  +l ++ DI+e    
    KIAA1282   128    KAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISET    170  

SM00100: domain 1 of 1, from 616 to 731: score 69.0, E = 5.8e-16
                   *->lfkaldaeelreladalepvrypaGevifrqGdpgdsfYiivsGeve
                      lf+a+++++lr+l+ al+p ++ +Ge++++qGd+   +Y++ sG++e
    KIAA1282   616    LFEAASRGCLRALSLALRPAFCTPGEYLIHQGDALQALYFVCSGSME 662  

                   vyktrlstledgreqilatlgpGdfFG.Elall..rrarsaaavalvela
                   v+k          +++la+lg+Gd++G El+  ++   ++a+++ l +++
    KIAA1282   663 VLKG---------GTVLAILGKGDLIGcELPRReqVVKANADVKGL-TYC 702  

                   tllridferflqllpenpqlllelllell<-*
                    l  + +  + + l+ +p+++ ++ + l    
    KIAA1282   703 VLQCLQLAGLHDSLALYPEFAPRFSRGLR    731  

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