hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-22294918/chunk_1/iprscan-20080501-22294918.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1283 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF07678.4.ls A-macroglobulin complement component 357.2 2.5e-104 1 PF07678.4.fs A-macroglobulin complement component 355.2 9.6e-104 1 PF01835.9.ls Alpha-2-macroglobulin family N-terminal reg 295.7 8.3e-86 1 PF01835.9.fs Alpha-2-macroglobulin family N-terminal reg 293.7 3.2e-85 1 PF07703.4.ls Alpha-2-macroglobulin family N-terminal reg 197.9 2.2e-56 1 PF07703.4.fs Alpha-2-macroglobulin family N-terminal reg 196.0 8.3e-56 1 PF07677.4.fs A-macroglobulin receptor 113.0 3e-35 1 PF00207.12.fs Alpha-2-macroglobulin family 120.5 3.8e-34 1 PF00207.12.ls Alpha-2-macroglobulin family 122.3 1.2e-33 1 PF07677.4.ls A-macroglobulin receptor 114.9 2.1e-31 1 PF00050.11.fs Kazal-type serine protease inhibitor domain 30.1 2.1e-07 1 PF07648.6.fs Kazal-type serine protease inhibitor domain 26.8 3.1e-06 1 PF00050.11.ls Kazal-type serine protease inhibitor domain 23.4 0.00013 1 PF07648.6.ls Kazal-type serine protease inhibitor domain 24.3 0.00041 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF01835.9.fs 1/1 15 289 .. 1 307 [] 293.7 3.2e-85 PF01835.9.ls 1/1 15 289 .. 1 307 [] 295.7 8.3e-86 PF07703.4.fs 1/1 450 628 .. 1 161 [] 196.0 8.3e-56 PF07703.4.ls 1/1 450 628 .. 1 161 [] 197.9 2.2e-56 PF00207.12.fs 1/1 749 844 .. 1 106 [] 120.5 3.8e-34 PF00207.12.ls 1/1 749 844 .. 1 106 [] 122.3 1.2e-33 PF07678.4.ls 1/1 1181 1430 .. 1 277 [] 357.2 2.5e-104 PF07678.4.fs 1/1 1181 1430 .. 1 277 [] 355.2 9.6e-104 PF07677.4.ls 1/1 1568 1658 .. 1 97 [] 114.9 2.1e-31 PF07677.4.fs 1/1 1568 1658 .. 1 97 [] 113.0 3e-35 PF07648.6.fs 1/1 1710 1743 .. 1 46 [. 26.8 3.1e-06 PF07648.6.ls 1/1 1710 1755 .. 1 61 [] 24.3 0.00041 PF00050.11.ls 1/1 1711 1755 .. 1 61 [] 23.4 0.00013 PF00050.11.fs 1/1 1711 1743 .. 1 49 [. 30.1 2.1e-07 Alignments of top-scoring domains: PF01835.9.fs: domain 1 of 1, from 15 to 289: score 293.7, E = 3.2e-85 *->lllvsliglstqsgdpkylVfvpsllrggpvenvkvelhdrkgevla ll + +++ ++q ++p+yl+++ps++r+g++e ++v+++++ ev + KIAA1283 15 LLSARDGVRAAQPQAPGYLIAAPSVFRAGVEEVISVTIFNSPREVTV 61 tgttdvqghvelspgkkklf.llalcsgfttlrslsssaldlsvkipgsr ++ ++qg + ++++++l+++ + ++ t lr ++ ++++++ ++ ++ KIAA1283 62 QAQLVAQGEPVVQSQGAILDkGTIKLKVPTGLRGQALLKVWGRGWQAEEG 111 f.fsIswrfkDqrqyVavqafpqveekvvlvsgqsgkvFiqTDkpiYrPG f+ ++++v v+g++++vFiqTDkp+YrP KIAA1283 112 PlFH--------------------NQTSVTVDGRGASVFIQTDKPVYRPQ 141 etVhfrvvRfsrdqdgknlrPlkedipPvtveiedPdGnrvksdqwvslk ++V++++ f++++ nlrP++e+ ++i dP+G+r++ +w++lk KIAA1283 142 HRVLISI--FTVSP---NLRPVNEKLE---AYILDPRGSRMI--EWRHLK 181 ldwenGlfslsfpLpeeaptGlWkivakygggpkqshsFeVeEyVlPrFe + ++G+ ++sfpL++++++G+W+i ++++g+ ++++ FeV++yVlP+Fe KIAA1283 182 PF-CCGITNMSFPLSDQPVLGEWFIFVEMQGHAYNKS-FEVQKYVLPKFE 229 VelklppkkflildeeltiticarYlyGkPVaggkvtvslgvqpldtakk + ++ pp++++ ld + t+t++arY++GkPV g +t++++v+ + ++++ KIAA1283 230 LLID-PPRYIQDLDACETGTVRARYTFGKPV-AGALTINMTVNGVGYYSH 277 alpgylfgvpde<-* + + +++++ KIAA1283 278 EVGRPVLRTTKI 289 PF01835.9.ls: domain 1 of 1, from 15 to 289: score 295.7, E = 8.3e-86 *->lllvsliglstqsgdpkylVfvpsllrggpvenvkvelhdrkgevla ll + +++ ++q ++p+yl+++ps++r+g++e ++v+++++ ev + KIAA1283 15 LLSARDGVRAAQPQAPGYLIAAPSVFRAGVEEVISVTIFNSPREVTV 61 tgttdvqghvelspgkkklf.llalcsgfttlrslsssaldlsvkipgsr ++ ++qg + ++++++l+++ + ++ t lr ++ ++++++ ++ ++ KIAA1283 62 QAQLVAQGEPVVQSQGAILDkGTIKLKVPTGLRGQALLKVWGRGWQAEEG 111 f.fsIswrfkDqrqyVavqafpqveekvvlvsgqsgkvFiqTDkpiYrPG f+ ++++v v+g++++vFiqTDkp+YrP KIAA1283 112 PlFH--------------------NQTSVTVDGRGASVFIQTDKPVYRPQ 141 etVhfrvvRfsrdqdgknlrPlkedipPvtveiedPdGnrvksdqwvslk ++V++++ f++++ nlrP++e+ ++i dP+G+r++ +w++lk KIAA1283 142 HRVLISI--FTVSP---NLRPVNEKLE---AYILDPRGSRMI--EWRHLK 181 ldwenGlfslsfpLpeeaptGlWkivakygggpkqshsFeVeEyVlPrFe + ++G+ ++sfpL++++++G+W+i ++++g+ ++++ FeV++yVlP+Fe KIAA1283 182 PF-CCGITNMSFPLSDQPVLGEWFIFVEMQGHAYNKS-FEVQKYVLPKFE 229 VelklppkkflildeeltiticarYlyGkPVaggkvtvslgvqpldtakk + ++ pp++++ ld + t+t++arY++GkPV g +t++++v+ + ++++ KIAA1283 230 LLID-PPRYIQDLDACETGTVRARYTFGKPV-AGALTINMTVNGVGYYSH 277 alpgylfgvpde<-* + + +++++ KIAA1283 278 EVGRPVLRTTKI 289 PF07703.4.fs: domain 1 of 1, from 450 to 628: score 196.0, E = 8.3e-56 *->sksyLhlsldnkkelkvGetlkvtinaplpgkelkitdfyYlvlsrG s++yL+l+++ +++l+vGe++ + ++++ p + ++yY v +rG KIAA1283 450 SQCYLQLQPP-SHPLQVGEEAYFSVKSTCPCN----FTLYYEVAARG 491 kIvltgrikvdggqgelk..............................gs +Ivl+g++++ +q+++k+ + +++ + ++ +++++++ ++ + + + KIAA1283 492 NIVLSGQQPAHTTQQRSKraapalekpirlthlsetepppapeaevdvCV 541 ttisipvtaeMaPsarlvaYyvrpdapdgtpevvaDSvwvdVedccknkv t++ + vt++M+P rl+++yvr ++g e vaDS+ + Ve ++n+v KIAA1283 542 TSLHLAVTPSMVPLGRLLVFYVR---ENG--EGVADSLQFAVETFFENQV 586 slsfspeqykPgelkvtLrvssgdpgslVgLsAVDkaVylLksg<-* s++ s ++++Pge v Lr+ +++ gs+V+++AVDk+VylL+sg KIAA1283 587 SVTYSANETQPGE-VVDLRI-RAARGSCVCVAAVDKSVYLLRSG 628 PF07703.4.ls: domain 1 of 1, from 450 to 628: score 197.9, E = 2.2e-56 *->sksyLhlsldnkkelkvGetlkvtinaplpgkelkitdfyYlvlsrG s++yL+l+++ +++l+vGe++ + ++++ p + ++yY v +rG KIAA1283 450 SQCYLQLQPP-SHPLQVGEEAYFSVKSTCPCN----FTLYYEVAARG 491 kIvltgrikvdggqgelk..............................gs +Ivl+g++++ +q+++k+ + +++ + ++ +++++++ ++ + + + KIAA1283 492 NIVLSGQQPAHTTQQRSKraapalekpirlthlsetepppapeaevdvCV 541 ttisipvtaeMaPsarlvaYyvrpdapdgtpevvaDSvwvdVedccknkv t++ + vt++M+P rl+++yvr ++g e vaDS+ + Ve ++n+v KIAA1283 542 TSLHLAVTPSMVPLGRLLVFYVR---ENG--EGVADSLQFAVETFFENQV 586 slsfspeqykPgelkvtLrvssgdpgslVgLsAVDkaVylLksg<-* s++ s ++++Pge v Lr+ +++ gs+V+++AVDk+VylL+sg KIAA1283 587 SVTYSANETQPGE-VVDLRI-RAARGSCVCVAAVDKSVYLLRSG 628 PF00207.12.fs: domain 1 of 1, from 749 to 844: score 120.5, E = 3.8e-34 *->sWLWediklgesgrlknkeisskelnvtlPDSITtWeitAfslSptk +W+W +++++ +++ +l v++PDSIT+W+ A++lS + KIAA1283 749 TWIWHCLNISDPSGEG-------TLSVKVPDSITSWVGEAVALSTSQ 788 GlcvaepplelkVFkpFFidLnLPYSVkRgEqveikaivfNYlekdieik Gl++aep + lk+FkpFF+d LP ++RgEqv i+ +v+NY++++ + KIAA1283 789 GLGIAEP-SLLKTFKPFFVDFMLPALIIRGEQVKIPLSVYNYMGTC--AE 835 Vrvtleese<-* V ++l KIAA1283 836 VYMKLSVPK 844 PF00207.12.ls: domain 1 of 1, from 749 to 844: score 122.3, E = 1.2e-33 *->sWLWediklgesgrlknkeisskelnvtlPDSITtWeitAfslSptk +W+W +++++ +++ +l v++PDSIT+W+ A++lS + KIAA1283 749 TWIWHCLNISDPSGEG-------TLSVKVPDSITSWVGEAVALSTSQ 788 GlcvaepplelkVFkpFFidLnLPYSVkRgEqveikaivfNYlekdieik Gl++aep + lk+FkpFF+d LP ++RgEqv i+ +v+NY++++ + KIAA1283 789 GLGIAEP-SLLKTFKPFFVDFMLPALIIRGEQVKIPLSVYNYMGTC--AE 835 Vrvtleese<-* V ++l KIAA1283 836 VYMKLSVPK 844 PF07678.4.ls: domain 1 of 1, from 1181 to 1430: score 357.2, E = 2.5e-104 *->qGYqrqLtYrkpDGSYSAFgnrdkpgSTWLTAFVvKvFaqArkrqea qGYqrqLtY++ DGSYSAFg+rd++gS WLTAFV+K+FaqAr KIAA1283 1181 QGYQRQLTYKRQDGSYSAFGERDASGSMWLTAFVLKSFAQARS---- 1223 gqeyItdIdenvIckavkWLilrQqkpdGsFrEsgpviHreMqGgvggvd +I ++d+ ++ a W i++Qq +dGsF +g+v++++ qG g KIAA1283 1224 ---FI-FVDPRELAAAKSWIIQQQQ-ADGSFLAVGRVLNKDIQG---GIH 1265 gdvsLTAFVlIALlEarkic.esvnslkesieKAldYLesqlesltnppY g v+LTA+V+ ALlE +++++e+ + s +KA ++Les+ + + +p Y KIAA1283 1266 GIVPLTAYVVVALLETGTASeEE----RGSTDKARHFLESAAPLAMDP-Y 1310 alAVYTAItaYALaLagkpekakallkkkLdslasedgdsrhWqesessq + A +t+YAL+L +p++ al +kL sla+ ++ +hW+ + s KIAA1283 1311 SCA----LTTYALTLLRSPAAPEAL--RKLRSLAIMRDGVTHWSL-SNSW 1353 dppksr.lyyfl.r.ypkataadVEtTAYALLalLtasaklkakdleeag d +k+ l f +r + +a+VE+TAYALL++ ++d + a+ KIAA1283 1354 DVDKGTfLS-FSdRvSQSVVSAEVEMTAYALLTY------TLLGDVAAAL 1396 pIvrWLikQrnygGGFsSTQDTvvALqALaeYaa<-* p+v+WL++Qrn+ GGFsSTQDT+vALqALaeYa+ KIAA1283 1397 PVVKWLSQQRNALGGFSSTQDTCVALQALAEYAI 1430 PF07678.4.fs: domain 1 of 1, from 1181 to 1430: score 355.2, E = 9.6e-104 *->qGYqrqLtYrkpDGSYSAFgnrdkpgSTWLTAFVvKvFaqArkrqea qGYqrqLtY++ DGSYSAFg+rd++gS WLTAFV+K+FaqAr KIAA1283 1181 QGYQRQLTYKRQDGSYSAFGERDASGSMWLTAFVLKSFAQARS---- 1223 gqeyItdIdenvIckavkWLilrQqkpdGsFrEsgpviHreMqGgvggvd +I ++d+ ++ a W i++Qq +dGsF +g+v++++ qG g KIAA1283 1224 ---FI-FVDPRELAAAKSWIIQQQQ-ADGSFLAVGRVLNKDIQG---GIH 1265 gdvsLTAFVlIALlEarkic.esvnslkesieKAldYLesqlesltnppY g v+LTA+V+ ALlE +++++e+ + s +KA ++Les+ + + +p Y KIAA1283 1266 GIVPLTAYVVVALLETGTASeEE----RGSTDKARHFLESAAPLAMDP-Y 1310 alAVYTAItaYALaLagkpekakallkkkLdslasedgdsrhWqesessq + A +t+YAL+L +p++ al +kL sla+ ++ +hW+ + s KIAA1283 1311 SCA----LTTYALTLLRSPAAPEAL--RKLRSLAIMRDGVTHWSL-SNSW 1353 dppksr.lyyfl.r.ypkataadVEtTAYALLalLtasaklkakdleeag d +k+ l f +r + +a+VE+TAYALL++ ++d + a+ KIAA1283 1354 DVDKGTfLS-FSdRvSQSVVSAEVEMTAYALLTY------TLLGDVAAAL 1396 pIvrWLikQrnygGGFsSTQDTvvALqALaeYaa<-* p+v+WL++Qrn+ GGFsSTQDT+vALqALaeYa+ KIAA1283 1397 PVVKWLSQQRNALGGFSSTQDTCVALQALAEYAI 1430 PF07677.4.ls: domain 1 of 1, from 1568 to 1658: score 114.9, E = 2.1e-31 *->SnMaivdVkLlSGFspdkedLkkLslgvdvyliskyEidkalsedgk SnMa+++V LlSGF +d+e+L++L l ++yE+ +++ KIAA1283 1568 SNMAVLEVPLLSGFRADIESLEQLLLDKHMG-MKRYEVA-----GRR 1608 VilYlDklsskeeeCfsFraeqtveVgnlqPAsVvVYDYYeperrctkfY V++Y+D+++s+ + C+ Fra ++ +Vg + +V+VYDYYep +t+fY KIAA1283 1609 VLFYFDEIPSRCLTCVRFRALRECVVGRTSALPVSVYDYYEPAFEATRFY 1658 <-* KIAA1283 - - PF07677.4.fs: domain 1 of 1, from 1568 to 1658: score 113.0, E = 3e-35 *->SnMaivdVkLlSGFspdkedLkkLslgvdvyliskyEidkalsedgk SnMa+++V LlSGF +d+e+L++L l ++yE+ +++ KIAA1283 1568 SNMAVLEVPLLSGFRADIESLEQLLLDKHMG-MKRYEVA-----GRR 1608 VilYlDklsskeeeCfsFraeqtveVgnlqPAsVvVYDYYeperrctkfY V++Y+D+++s+ + C+ Fra ++ +Vg + +V+VYDYYep +t+fY KIAA1283 1609 VLFYFDEIPSRCLTCVRFRALRECVVGRTSALPVSVYDYYEPAFEATRFY 1658 <-* KIAA1283 - - PF07648.6.fs: domain 1 of 1, from 1710 to 1743: score 26.8, E = 3.1e-06 *->eCseyrsqvrNGlaCpreegydPVCGsDGckTYsNeCalgcanCka< C++ C ++g +PVCGsDG + Y+++C l+ a+C++ KIAA1283 1710 GCDH---------DC-GAQG-NPVCGSDG-VVYASACRLREAACRQ 1743 -* KIAA1283 - - PF07648.6.ls: domain 1 of 1, from 1710 to 1755: score 24.3, E = 0.00041 *->eCseyrsqvrNGlaCpreegydPVCGsDGckTYsNeCalgcanCkag C++ C ++g +PVCGsDG + Y+++C l+ a+C++ KIAA1283 1710 GCDH---------DC-GAQG-NPVCGSDG-VVYASACRLREAACRQA 1744 flegelrlkydGeC<-* ++l+ C KIAA1283 1745 ---APLEPAPPSCC 1755 PF00050.11.ls: domain 1 of 1, from 1711 to 1755: score 23.4, E = 0.00013 *->CsrypnptskDGklvaCpreydPVCGsDGvTYsNECeLkkaaCaenv C++ C ++ +PVCGsDGv Y++ C L++aaC KIAA1283 1711 CDHD------------CGAQGNPVCGSDGVVYASACRLREAAC---- 1741 eqgtniekkhdGpC<-* +q + +e + C KIAA1283 1742 RQAAPLEPAPPSCC 1755 PF00050.11.fs: domain 1 of 1, from 1711 to 1743: score 30.1, E = 2.1e-07 *->CsrypnptskDGklvaCpreydPVCGsDGvTYsNECeLkkaaCaenv C++ C ++ +PVCGsDGv Y++ C L++aaC KIAA1283 1711 CDHD------------CGAQGNPVCGSDGVVYASACRLREAAC---- 1741 eq<-* +q KIAA1283 1742 RQ 1743 //