hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22503186/chunk_1/iprscan-20080501-22503186.nocrc
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Query sequence: KIAA1295
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00326                                                  86.0    4.5e-21   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00326    1/2      10    65 ..     1    58 []    43.7  2.5e-08
SM00326    2/2     492   550 .]     1    58 []    42.3  6.3e-08

Alignments of top-scoring domains:
SM00326: domain 1 of 2, from 10 to 65: score 43.7, E = 2.5e-08
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      e++  +  ++ + +d +sF++G +++v+ek+ +gWw+ ++    keG
    KIAA1295    10    EEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIE--DKEG 54   

                   lfPsnYVeeie<-*
                   + P++++ +++   
    KIAA1295    55 WAPATFIDKYK    65   

SM00326: domain 2 of 2, from 492 to 550: score 42.3, E = 6.3e-08
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnr..tGk
                        +vA+ D+e+ + d  sF++G +++v ek+++gWw +++ ++    
    KIAA1295   492    SLYVAVADFEG-DKDTSSFQEGTVFEVREKNSSGWWFCQVLSgaPSW 537  

                   eGlfPsnYVeeie<-*
                   eG++PsnY+++++   
    KIAA1295   538 EGWIPSNYLRKKP    550  

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