hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22554292/chunk_1/iprscan-20080501-22554292.nocrc
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Query sequence: KIAA1298
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00782.11.fs Dual specificity phosphatase, catalytic doma   132.5      8e-38   1
PF00782.11.ls Dual specificity phosphatase, catalytic doma   116.6    6.4e-32   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00782.11.ls   1/1       3   135 ..     1   173 []   116.6  6.4e-32
PF00782.11.fs   1/1      23   135 ..    29   173 .]   132.5    8e-38

Alignments of top-scoring domains:
PF00782.11.ls: domain 1 of 1, from 3 to 135: score 116.6, E = 6.4e-32
                   *->gpveilphnlYLGsystasadlaflsklgItyviNvteevpnpfelc
                       +            + +    l  +   +++y++Nvt+e++n     
    KIAA1298     3    RCYLSWDR------WTSPP--LSSIIFISVDYILNVTREIDN----- 36   

                   kNdRhyteayflknsgilylriPhveDhIeYyhiawnhetkiskylpeav
                              + ++ + y +i  v D         +++t++ ++ +ea+
    KIAA1298    37 -----------FFPGLFAYHNIR-VYD---------EETTDLLAHWNEAY 65   

                   eFIdkarqkggkVLVHCqAGiSRSAtliiAYLMktrnmslneAysfvyvY
                    FI+ka++++ k+LVHC++G+SRSA+ +iAY Mk ++++l+ Ay++v   
    KIAA1298    66 HFINKAKRNHSKCLVHCKMGVSRSASTVIAYAMKEFGWPLEKAYNYV--- 112  

                   hikerRcpaisPNfgFlrQLleyerk<-*
                     k++R ++ +PN+gF+rQL eye +   
    KIAA1298   113 --KQKR-SITRPNAGFMRQLSEYEGI    135  

PF00782.11.fs: domain 1 of 1, from 23 to 135: score 132.5, E = 8e-38
                   *->gItyviNvteevpnpfelckNdRhyteayflknsgilylriPhveDh
                      +++y++Nvt+e++n                + ++ + y +i  v D 
    KIAA1298    23    SVDYILNVTREIDN----------------FFPGLFAYHNIR-VYD- 51   

                   IeYyhiawnhetkiskylpeaveFIdkarqkggkVLVHCqAGiSRSAtli
                           +++t++ ++ +ea+ FI+ka++++ k+LVHC++G+SRSA+ +
    KIAA1298    52 --------EETTDLLAHWNEAYHFINKAKRNHSKCLVHCKMGVSRSASTV 93   

                   iAYLMktrnmslneAysfvyvYhikerRcpaisPNfgFlrQLleyerk<-
                   iAY Mk ++++l+ Ay++v     k++R ++ +PN+gF+rQL eye +  
    KIAA1298    94 IAYAMKEFGWPLEKAYNYV-----KQKR-SITRPNAGFMRQLSEYEGI   135  

                   *
                    
    KIAA1298     -   -    

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