hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23175918/chunk_1/iprscan-20080501-23175918.nocrc
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Query sequence: KIAA1311
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00360                                                  24.7     0.0093   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00360     1/1     430   499 ..     1   121 []    24.7   0.0093

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 430 to 499: score 24.7, E = 0.0093
                   *->tlfVgNLndppdvte.edLrelFkevksvevfraeteskfGkvvsvr
                      +l V+ +  p + +    L e+F              skfG++v+++
    KIAA1311   430    KLEVKKI--PQELNNiTKLNEHF--------------SKFGTIVNIQ 460  

                   ivrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAll
                   +  + d                            a +++ + e+A+kA  
    KIAA1311   461 VAFKGD-------------------------PEAALIQYLTNEEARKA-- 483  

                   iealnaskGkeledgGrptlglrVe<-*
                   i+        +l  ++r    +rV    
    KIAA1311   484 ISSTE----AVL--NNRF---IRVL    499  

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