hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23263702/chunk_1/iprscan-20080501-23263702.nocrc
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Query sequence: KIAA1316
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.fs HEAT repeat                                     51.5    1.9e-13   6
PF02985.12.ls HEAT repeat                                     46.2      1e-10   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   2/5     395   431 ..     1    36 []    18.1    0.029
PF02985.12.ls   3/5     477   514 ..     1    36 []    14.9     0.27

Alignments of top-scoring domains:
PF02985.12.ls: domain 2 of 5, from 395 to 431: score 18.1, E = 0.029
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e+     l l++ +l++p+p  R+aAae+ ++la+ +   
    KIAA1316   395    EeMKRFALTLVMGALESPNPLLRCAAAESWARLAQMV    431  

PF02985.12.ls: domain 3 of 5, from 477 to 514: score 14.9, E = 0.27
                   *->e.ildellplllkllnDp.dpeVReaAaeaLgalaevl<-*
                      +++l++ + +l +l +D+++p+V+  A+ +L+ +++ +   
    KIAA1316   477    SqHLNSCIGILYTLAQDStSPDVQTWALHSLSLIIDSA    514  

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