hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-00444631/chunk_1/iprscan-20080502-00444631.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1363 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF07859.3.fs alpha/beta hydrolase fold 199.8 6e-57 2 PF07859.3.ls alpha/beta hydrolase fold 176.5 5.9e-50 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF07859.3.fs 1/2 131 274 .. 1 168 [. 124.4 3e-34 PF07859.3.ls 1/1 131 404 .. 1 247 [] 176.5 5.9e-50 PF07859.3.fs 2/2 343 404 .. 182 247 .] 75.4 3.6e-20 Alignments of top-scoring domains: PF07859.3.fs: domain 1 of 2, from 131 to 274: score 124.4, E = 3e-34 *->lvYfHGGGFvlGsldth.YdalcrrLAaragavVvSVDYRLAPEhpf +vY+HGGG+ l s+ Yd lc+++A++++av+vS++YRL P f KIAA1363 131 VVYIHGGGWALASAKIRyYDELCTAMAEELNAVIVSIEYRLVPKVYF 177 PAAvdDayaAlrWlaehavgsggeddpwlelg.aDpsriavaGDSAGGNL P ++ D+++A+++ ++ l+++ +Dp+ri++ GDSAGGNL KIAA1363 178 PEQIHDVVRATKYFLKPE---------VLQKYmVDPGRICISGDSAGGNL 218 AaavAqlrardrGgplaeldpdlspvrpagqvLiyPfFggtDlrertese Aaa+ + + + ++ ++++ q+LiyP++ ++D+ t + KIAA1363 219 AAALG-QQFTQDASLK---------NKLKLQALIYPVLQALDF--NT--P 254 syrlsreyadgplLtrdamdwfw<-* sy ++ +p+L+r m +w KIAA1363 255 SY---QQNVNTPILPRYVMVKYW 274 PF07859.3.ls: domain 1 of 1, from 131 to 404: score 176.5, E = 5.9e-50 *->lvYfHGGGFvlGsldth.YdalcrrLAaragavVvSVDYRLAPEhpf +vY+HGGG+ l s+ Yd lc+++A++++av+vS++YRL P f KIAA1363 131 VVYIHGGGWALASAKIRyYDELCTAMAEELNAVIVSIEYRLVPKVYF 177 PAAvdDayaAlrWlaehavgsggeddpwlelg.aDpsriavaGDSAGGNL P ++ D+++A+++ ++ l+++ +Dp+ri++ GDSAGGNL KIAA1363 178 PEQIHDVVRATKYFLKPE---------VLQKYmVDPGRICISGDSAGGNL 218 AaavAqlrardrGgplaeldpdlspvrpagqvLiyPfFggtDlrertese Aaa+ + + + ++ ++++ q+LiyP++ ++D+ t + KIAA1363 219 AAALG-QQFTQDASLK---------NKLKLQALIYPVLQALDF--NT--P 254 syrlsreyadgplLtrdamdwfwrlYL.pgadrddP..as.lasPl.... sy ++ +p+L+r m +w Y+++ d+ + + ++ s l+ ++ KIAA1363 255 SY---QQNVNTPILPRYVMVKYWVDYFkGNYDFVQAmiVNnHTS-Ldvee 300 .............................................fapas + + + ++ + + +++ ++ +++++ + ++ ++ + + ap KIAA1363 301 aaavrarlnwtsllpasftknykpvvqttgnarivqelpqlldarSAPLI 350 pdlegLsGLPPalvvvAefDpLrDegeaYAerLraWaGVpVelveypGmi +d + L+ LP++++ ++e+D+LrD+g++YA+rL++ aGV+V+l ++++ + KIAA1363 351 ADQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLES-AGVEVTLDHFEDGF 399 HgFll<-* Hg ++ KIAA1363 400 HGCMI 404 PF07859.3.fs: domain 2 of 2, from 343 to 404: score 75.4, E = 3.6e-20 *->s.lasPlfapaspdlegLsGLPPalvvvAefDpLrDegeaYAerLra + + +Pl a d + L+ LP++++ ++e+D+LrD+g++YA+rL++ KIAA1363 343 DaRSAPLIA----DQAVLQLLPKTYILTCEHDVLRDDGIMYAKRLES 385 WaGVpVelveypGmiHgFll<-* aGV+V+l ++++ +Hg ++ KIAA1363 386 -AGVEVTLDHFEDGFHGCMI 404 //