hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00480092/chunk_1/iprscan-20080502-00480092.nocrc
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Query sequence: KIAA1365
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00595.14.fs PDZ domain (Also known as DHR or GLGF)          73.1    6.8e-20   1
PF00595.14.ls PDZ domain (Also known as DHR or GLGF)          75.0    2.1e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00595.14.fs   1/1     742   826 ..     1    86 []    73.1  6.8e-20
PF00595.14.ls   1/1     742   826 ..     1    86 []    75.0  2.1e-19

Alignments of top-scoring domains:
PF00595.14.fs: domain 1 of 1, from 742 to 826: score 73.1, E = 6.8e-20
                   *->evtlekedkrgglGfsikggsdkga......dkgifvsevlpGsgaA
                       v++e   k+ glGfsi+gg ++++++ +++dkgifv++v+p+ g+A
    KIAA1365   742    CVRIE---KNPGLGFSISGGISGQGnpfkpsDKGIFVTRVQPD-GPA 784  

                   eagGrLqaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                        Lq+GD+Il+ NG +++ ++he+avl+lk+  + +v L+++   
    KIAA1365   785 SNL--LQPGDKILQANGHSFVHMEHEKAVLLLKSFQN-TVDLVIQ    826  

PF00595.14.ls: domain 1 of 1, from 742 to 826: score 75.0, E = 2.1e-19
                   *->evtlekedkrgglGfsikggsdkga......dkgifvsevlpGsgaA
                       v++e   k+ glGfsi+gg ++++++ +++dkgifv++v+p+ g+A
    KIAA1365   742    CVRIE---KNPGLGFSISGGISGQGnpfkpsDKGIFVTRVQPD-GPA 784  

                   eagGrLqaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                        Lq+GD+Il+ NG +++ ++he+avl+lk+  + +v L+++   
    KIAA1365   785 SNL--LQPGDKILQANGHSFVHMEHEKAVLLLKSFQN-TVDLVIQ    826  

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