hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00525473/chunk_1/iprscan-20080502-00525473.nocrc
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Query sequence: KIAA1368
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 639.6     1e-187   1
SM00423                                                  25.3     0.0086   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1      58   489 ..     1   532 []   639.6   1e-187
SM00423    1/1     516   571 ..     1    56 []    25.3   0.0086

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 58 to 489: score 639.6, E = 1e-187
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      ++++ +  ++g  +ly++Ar++iy ++++++  ++e    ++l+w+s
    KIAA1368    58    LDIQMIMIMNG--TLYIAARDHIYTVDIDTS-HTEEIYCSKKLTWKS 101  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                    ++      +++ C++kgk    + ++eC+N+i+vLl+ nd    + L+v
    KIAA1368   102 RQA------DVDTCRMKGK----H-KDECHNFIKVLLKKND----DALFV 136  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CGTnaf+P  +Cr + +++lep                    +++ sg++
    KIAA1368   137 CGTNAFNP--SCRNYKMDTLEP-------------------FGDEFSGMA 165  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   +CPyd++++++++++dg       LYs+t++df++       +d++i+Rs
    KIAA1368   166 RCPYDAKHANVALFADG------KLYSATVTDFLA-------IDAVIYRS 202  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipesgdgdfVYF
                   lg        e++ lrt ++dskw   l+ep+FV+a+++     gd++YF
    KIAA1368   203 LG--------ESPTLRTVKHDSKW---LKEPYFVQAVDY-----GDYIYF 236  

                   FFrEtaveainrdcssekavvsRVARvCknDvGG.qrlLqkkWtSFLKar
                   FFrE+ave+++   +  k+v++RVA+vCknD+GG+qr+L+k WtSFLKar
    KIAA1368   237 FFREIAVEYNT--MG--KVVFPRVAQVCKNDMGGsQRVLEKQWTSFLKAR 282  

                   LnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYgVFsqgq
                   LnCsvp  g+++ fyFn+LQav++        +++    dv+ ++Fs   
    KIAA1368   283 LNCSVP--GDSH-FYFNILQAVTDVIR----INGR----DVVLATFS--- 318  

                   qtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpvegnk
                    t++    n+ipgSAVCa+++ dI  vF  G+fk++++p+s w+pv++++
    KIAA1368   319 -TPY----NSIPGSAVCAYDMLDIASVFT-GRFKEQKSPDSTWTPVPDER 362  

                   vPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpPltgr
                   vP+prPG+C++++  e   + +s  +Pdd+lnfik+hpLmdeavp++++r
    KIAA1368   363 VPKPRPGCCAGSSSLE--RYATSNEFPDDTLNFIKTHPLMDEAVPSIFNR 410  

                   PllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvvvsrs
                   P++ +t+++yrlT+iaVd+++g++++   +tV+FlG++ G +lK++   +
    KIAA1368   411 PWFLRTMVRYRLTKIAVDTAAGPYQN---HTVVFLGSEKGIILKFLARIG 457  

                   ssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   +s   + ++ s+ lee++v+     ++ d v ++     
    KIAA1368   458 NS---GFLNDSLFLEEMSVYNSE-KCSYDGVEDKRI    489  

SM00423: domain 1 of 1, from 516 to 571: score 25.3, E = 0.0086
                   *->rCsqygvtsC.seCllardpygCgWCssegrCtrgerCderrgsrqn
                      rC+++  + C+  C+++rdpy CgW + +g+C++++  ++ ++ +q+
    KIAA1368   516    RCERH--GKCkKTCIASRDPY-CGWIKEGGACSHLSPNSRLTF-EQD 558  

                   wssg...pssqCp<-*
                   +++g++++   C+   
    KIAA1368   559 IERGntdGLGDCH    571  

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