hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01025575/chunk_1/iprscan-20080502-01025575.nocrc
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Query sequence: KIAA1374
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                  97.8    1.3e-24   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/6      82   121 ..     1    46 []    31.2  0.00014
SM00320    2/6     123   163 ..     1    46 []     6.4       47
SM00320    3/6     164   203 ..     1    46 []    30.4  0.00025
SM00320    4/6     205   243 ..     1    46 []    23.2    0.037
SM00320    5/6     245   284 ..     1    46 []     6.4       48
SM00320    6/6     483   520 ..     1    46 []     0.3  4.5e+02

Alignments of top-scoring domains:
SM00320: domain 1 of 6, from 82 to 121: score 31.2, E = 0.00014
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +++ ++ ++H g  +V++ +++  g      + l++ ++Dg+i++W
    KIAA1374    82    LgRVEKSVEAHCG--AVLAGRWNYEG------TALVTVGeDGQIKIW 120  

                   d<-*
                   +   
    KIAA1374   121 S    121  

SM00320: domain 2 of 6, from 123 to 163: score 6.4, E = 47
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t+ l +tl       pV+sva+ pd+     +++l+++++   i+  
    KIAA1374   123    TgMLRSTLAQQGT--PVYSVAWGPDS-----EKVLYTAGkQLIIKPL 162  

                   d<-*
                       
    KIAA1374   163 Q    163  

SM00320: domain 3 of 6, from 164 to 203: score 30.4, E = 0.00025
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++  +  +k+H+g   ++ v++++ +      +l++s+++D++ ++W
    KIAA1374   164    PnAKVLQWKAHDG--IILKVDWNSVN------DLILSAGeDCKYKVW 202  

                   d<-*
                   d   
    KIAA1374   203 D    203  

SM00320: domain 4 of 6, from 205 to 243: score 23.2, E = 0.037
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +++l+  + H++  p+tsva+ pdg      +l+a+gs    +rl 
    KIAA1374   205    YgRPLYNSQPHEH--PITSVAWAPDG------ELFAVGSfHT-LRLC 242  

                   d<-*
                   d   
    KIAA1374   243 D    243  

SM00320: domain 5 of 6, from 245 to 284: score 6.4, E = 48
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t+   +  k  tg  ++  +a+s dg      +++a ++++g++ + 
    KIAA1374   245    TgWSYALEKPNTG--SIFNIAWSIDG------TQIAGACgNGHVVFA 283  

                   d<-*
                   +   
    KIAA1374   284 H    284  

SM00320: domain 6 of 6, from 483 to 520: score 0.3, E = 4.5e+02
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +k  +++k  t    V+++a++++         +++g +D    +W
    KIAA1374   483    FgKEEQIIKLGTM---VHTLAWNDT-------CNILCGLqDTRFIVW 519  

                   d<-*
                       
    KIAA1374   520 Y    520  

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