HUGE

Gene/Protein Characteristic Table for KIAA1377

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05657
Accession No. :	AB037798
Description :
HUGO Gene Name :
Clone Name :	fj04709 [Vector Info]
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 3916 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 949 bp

Genome contig ID gi51511727f_101223970
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
ACACCAGCCTGGGTGACAGTGTGAGACCCAGCCTC
Flanking genome sequence
(150565 - 150614)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAAAAAAAAAAAAGTGATGAATCAAAATTAGAAATTAAGAGTTTT

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 11 f 101323970 101374533 8 99.4 Terminal No-hit

Features of the protein sequence	Description

Length: 988 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAG52970	99.8	unnamed protein...	Homo sapiens
XP_001150420	96.7	hypothetical pr...	Pan troglodytes
XP_508716	96.7	hypothetical pr...	Pan troglodytes
XP_001150291	96.6	hypothetical pr...	Pan troglodytes
BAG59033	99.8	unnamed protein...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: GTGAAGTTTAACAGAGCAGTG

Primer_r
: CTCTACTCACAAGCTTCATCC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 11

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: GTGAAGTTTAACAGAGCAGTG
Primer_r	: CTCTACTCACAAGCTTCATCC
PCR product length	: 152 bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	949 bp
Genome contig ID	gi51511727f_101223970
PolyA signal sequence (None)	+--------+--------+----*----+---- ACACCAGCCTGGGTGACAGTGTGAGACCCAGCCTC
Flanking genome sequence (150565 - 150614)	----+--------+--------+--------+--------+----* AAAAAAAAAAAAAAAAAAGTGATGAATCAAAATTAGAAATTAAGAGTTTT

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	11	f	101323970	101374533	8	99.4	Terminal No-hit

Gene/Protein Characteristic Table for KIAA1377

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information