hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-01210791/chunk_1/iprscan-20080502-01210791.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1385 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00994.14.ls Probable molybdopterin binding domain 314.2 2.1e-91 2 PF00994.14.fs Probable molybdopterin binding domain 310.7 2.4e-90 2 PF03453.7.ls MoeA N-terminal region (domain I and II 254.8 1.7e-73 1 PF03453.7.fs MoeA N-terminal region (domain I and II 252.8 6.4e-73 1 PF03454.5.fs MoeA C-terminal region (domain IV) 93.1 7e-26 1 PF03454.5.ls MoeA C-terminal region (domain IV) 95.0 2.1e-25 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00994.14.ls 1/2 50 196 .. 1 185 [] 143.5 5.3e-40 PF00994.14.fs 1/2 50 196 .. 1 185 [] 141.7 5.7e-41 PF03453.7.fs 1/1 355 521 .. 1 173 [] 252.8 6.4e-73 PF03453.7.ls 1/1 355 521 .. 1 173 [] 254.8 1.7e-73 PF00994.14.ls 2/2 534 677 .. 1 185 [] 170.8 3.3e-48 PF00994.14.fs 2/2 534 677 .. 1 185 [] 169.0 6.5e-49 PF03454.5.fs 1/1 690 766 .. 1 83 [] 93.1 7e-26 PF03454.5.ls 1/1 690 766 .. 1 83 [] 95.0 2.1e-25 Alignments of top-scoring domains: PF00994.14.ls: domain 1 of 2, from 50 to 196: score 143.5, E = 5.3e-40 *->aiistGDEllepgeplpGqivDsNgpmLaalLres..aGaevirygi ++++++D + + +D++g L++l++ ++ +G+++ +y i KIAA1385 50 GVLTVSDSCF------RNLAEDRSGINLKDLVQDPslLGGTISAYKI 90 VpDdpeaikealeaaalrea.vDvvitTGGtGpgpdDvTpealaelggre VpD++e+ike+l + +++e + +++tTGGtG+ p+DvTpea++e+++re KIAA1385 91 VPDEIEEIKETL-IDWCDEKeLNLILTTGGTGFAPRDVTPEATKEVIERE 139 lpgfeelfhgvsmkPGkrtgrmeanqsldrkqAmlPeGailpNPvgvapg pg ++++ + s+ v+p KIAA1385 140 APGMALAMLMGSLN--------------------------------VTPL 157 ailsratagv.kptLvflgLPGnPvaalvmfellvlrPlLrh<-* +lsr ++g++++tL++ +LPG+ + ++++f++++ P+L+h KIAA1385 158 GMLSRPVCGIrGKTLII-NLPGSKKGSQECFQFIL--PALPH 196 PF00994.14.fs: domain 1 of 2, from 50 to 196: score 141.7, E = 5.7e-41 *->aiistGDEllepgeplpGqivDsNgpmLaalLres..aGaevirygi ++++++D + + +D++g L++l++ ++ +G+++ +y i KIAA1385 50 GVLTVSDSCF------RNLAEDRSGINLKDLVQDPslLGGTISAYKI 90 VpDdpeaikealeaaalrea.vDvvitTGGtGpgpdDvTpealaelggre VpD++e+ike+l + +++e + +++tTGGtG+ p+DvTpea++e+++re KIAA1385 91 VPDEIEEIKETL-IDWCDEKeLNLILTTGGTGFAPRDVTPEATKEVIERE 139 lpgfeelfhgvsmkPGkrtgrmeanqsldrkqAmlPeGailpNPvgvapg pg ++++ + s+ v+p KIAA1385 140 APGMALAMLMGSLN--------------------------------VTPL 157 ailsratagv.kptLvflgLPGnPvaalvmfellvlrPlLrh<-* +lsr ++g++++tL++ +LPG+ + ++++f++++ P+L+h KIAA1385 158 GMLSRPVCGIrGKTLII-NLPGSKKGSQECFQFIL--PALPH 196 PF03453.7.fs: domain 1 of 1, from 355 to 521: score 252.8, E = 6.4e-73 *->lisveEAlkillelakplprletEtVpLeeAlGRvLAeDivApidlP l+s+++A+ +le+ + l+ tE+++ + +GRvLA+D++A+ +lP KIAA1385 355 LTSMDKAFITVLEMTPVLG---TEIINYRDGMGRVLAQDVYAKDNLP 398 pFdrSAMDGYAVraeDtagasegenPveLkVvGeiaAGevpdlevgpGeA pF++S +DGYAVra+D++g + ++Ge+ AGe+p +v pG+ KIAA1385 399 PFPASVKDGYAVRAADGPGDR--------FIIGESQAGEQPTQTVMPGQV 440 vrImTGApiPeGADAVVmvEdtelegd.s.....grvrilprpvkpGqNI r++TGApiP GADAVV+vEdtel+ ++++++++ +vril +++pGq+I KIAA1385 441 MRVTTGAPIPCGADAVVQVEDTELIREsDdgteeLEVRIL-VQARPGQDI 489 rrkGeDikkGdvlLrkGtrltPaeiglLAslG<-* r++G Dik+G+++L kGt+++P eiglLA++G KIAA1385 490 RPIGHDIKRGECVLAKGTHMGPSEIGLLATVG 521 PF03453.7.ls: domain 1 of 1, from 355 to 521: score 254.8, E = 1.7e-73 *->lisveEAlkillelakplprletEtVpLeeAlGRvLAeDivApidlP l+s+++A+ +le+ + l+ tE+++ + +GRvLA+D++A+ +lP KIAA1385 355 LTSMDKAFITVLEMTPVLG---TEIINYRDGMGRVLAQDVYAKDNLP 398 pFdrSAMDGYAVraeDtagasegenPveLkVvGeiaAGevpdlevgpGeA pF++S +DGYAVra+D++g + ++Ge+ AGe+p +v pG+ KIAA1385 399 PFPASVKDGYAVRAADGPGDR--------FIIGESQAGEQPTQTVMPGQV 440 vrImTGApiPeGADAVVmvEdtelegd.s.....grvrilprpvkpGqNI r++TGApiP GADAVV+vEdtel+ ++++++++ +vril +++pGq+I KIAA1385 441 MRVTTGAPIPCGADAVVQVEDTELIREsDdgteeLEVRIL-VQARPGQDI 489 rrkGeDikkGdvlLrkGtrltPaeiglLAslG<-* r++G Dik+G+++L kGt+++P eiglLA++G KIAA1385 490 RPIGHDIKRGECVLAKGTHMGPSEIGLLATVG 521 PF00994.14.ls: domain 2 of 2, from 534 to 677: score 170.8, E = 3.3e-48 *->aiistGDEllepgepl.pGqivDsNgpmLaalLresaGaevirygiV a+ stG+Ell+p+++l pG+i+DsN+ +L a ++e +G+ i +giV KIAA1385 534 AVMSTGNELLNPEDDLlPGKIRDSNRSTLLATIQE-HGYPTINLGIV 579 pDdpeaikealeaaalreavDvvitTGGtGpgpdDvTpealaelggrelp +D+p+++ +al + +++a Dv+it+GG+++g++D+ +++l + + KIAA1385 580 GDNPDDLLNAL-NEGISRA-DVIITSGGVSMGEKDYLKQVLDIDLHAQ-- 625 gfeelfhgvsmkPGkrtgrmeanqsldrkqAmlPeGailpNPvgvapgai ++f +v mkPG P+++a+ i KIAA1385 626 ---IHFGRVFMKPGL--------------------------PTTFATLDI 646 lsratagv.kptLvflgLPGnPvaalvmfellvlrPlLrh<-* gv+k +f +LPGnPv+a v+ l+v +P+Lr+ KIAA1385 647 D-----GVrKI--IF-ALPGNPVSAVVTCNLFV-VPALRK 677 PF00994.14.fs: domain 2 of 2, from 534 to 677: score 169.0, E = 6.5e-49 *->aiistGDEllepgepl.pGqivDsNgpmLaalLresaGaevirygiV a+ stG+Ell+p+++l pG+i+DsN+ +L a ++e +G+ i +giV KIAA1385 534 AVMSTGNELLNPEDDLlPGKIRDSNRSTLLATIQE-HGYPTINLGIV 579 pDdpeaikealeaaalreavDvvitTGGtGpgpdDvTpealaelggrelp +D+p+++ +al + +++a Dv+it+GG+++g++D+ +++l + + KIAA1385 580 GDNPDDLLNAL-NEGISRA-DVIITSGGVSMGEKDYLKQVLDIDLHAQ-- 625 gfeelfhgvsmkPGkrtgrmeanqsldrkqAmlPeGailpNPvgvapgai ++f +v mkPG P+++a+ i KIAA1385 626 ---IHFGRVFMKPGL--------------------------PTTFATLDI 646 lsratagv.kptLvflgLPGnPvaalvmfellvlrPlLrh<-* gv+k +f +LPGnPv+a v+ l+v +P+Lr+ KIAA1385 647 D-----GVrKI--IF-ALPGNPVSAVVTCNLFV-VPALRK 677 PF03454.5.fs: domain 1 of 1, from 690 to 766: score 93.1, E = 7e-26 *->karLaedlksapgRrefvRvrltededdgrgseglyvtpigknlsqg karL++d+k +p R+e++R++lt++ +++ ++++++++g+ q+ KIAA1385 690 KARLSCDVKLDP-RPEYHRCILTWH--HQE--PLPWAQSTGN---QM 728 SGilsslaeAdgliviPegten..gleaGeeVeVillk<-* S++l+s+++A+gl+++P+ te+ +l++Ge+V+V++++ KIAA1385 729 SSRLMSMRSANGLLMLPPKTEQyvELHKGEVVDVMVIG 766 PF03454.5.ls: domain 1 of 1, from 690 to 766: score 95.0, E = 2.1e-25 *->karLaedlksapgRrefvRvrltededdgrgseglyvtpigknlsqg karL++d+k +p R+e++R++lt++ +++ ++++++++g+ q+ KIAA1385 690 KARLSCDVKLDP-RPEYHRCILTWH--HQE--PLPWAQSTGN---QM 728 SGilsslaeAdgliviPegten..gleaGeeVeVillk<-* S++l+s+++A+gl+++P+ te+ +l++Ge+V+V++++ KIAA1385 729 SSRLMSMRSANGLLMLPPKTEQyvELHKGEVVDVMVIG 766 //