hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02120639/chunk_1/iprscan-20080502-02120639.nocrc
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Query sequence: KIAA1414
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                     70.1    6.7e-18   6
PF02985.12.fs HEAT repeat                                     63.3    9.5e-17   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   1/6     362   398 ..     1    36 []    16.5    0.088
PF02985.12.ls   4/6     576   612 ..     1    36 []    18.6    0.021
PF02985.12.ls   5/6     804   840 ..     1    36 []    13.1     0.94

Alignments of top-scoring domains:
PF02985.12.ls: domain 1 of 6, from 362 to 398: score 16.5, E = 0.088
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e+++++ l l++  l+ p+p  R+aA eaLg++a+v+   
    KIAA1414   362    EeVRKSALTLVMGPLDNPNPILRCAAGEALGRMAQVV    398  

PF02985.12.ls: domain 4 of 6, from 576 to 612: score 18.6, E = 0.021
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                         l++l+p l+ +l++++   R+aA+ +L +la+     
    KIAA1414   576    HvNLSSLVPSLCVHLCSSHLLLRRAAVACLRQLAQRE    612  

PF02985.12.ls: domain 5 of 6, from 804 to 840: score 13.1, E = 0.94
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +l++l+ + + + +D +   R+a ++aL ++++++   
    KIAA1414   804    VlHLSDLIRMAFMAATDHSNQLRMAGLQALEDIIKKF    840  

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