hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02340662/chunk_1/iprscan-20080502-02340662.nocrc
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Query sequence: KIAA1427
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                       91.9    9.2e-27   2
PF00168.20.ls C2 domain                                       87.4    4.2e-23   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.ls   1/2     188   272 ..     1    88 []    21.1   0.0031
PF00168.20.fs   1/2     202   272 ..    19    88 .]    27.6  1.2e-07
PF00168.20.fs   2/2     317   407 ..     1    88 []    64.3  1.5e-18
PF00168.20.ls   2/2     317   407 ..     1    88 []    66.3  9.4e-17

Alignments of top-scoring domains:
PF00168.20.ls: domain 1 of 2, from 188 to 272: score 21.1, E = 0.0031
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qkkkTkvikkt
                      L Vt +eA          g +D+YV  ++ + + +++  +T  +k+ 
    KIAA1427   188    LFVTRLEAVTSNH----DGGCDCYVQGSVAN-RTGsVEAQTALKKRQ 229  

                   lNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   l+ +W+E +++++++++l   tL++++   drf+r+ + Ge +   
    KIAA1427   230 LHTTWEEGLVLPLAEEELPTaTLTLTLRTCDRFSRHSVAGELR    272  

PF00168.20.fs: domain 1 of 2, from 202 to 272: score 27.6, E = 1.2e-07
                   *->gksDPYVkvylggdkkd.qkkkTkvikktlNPvWNEtFtFevpppdl
                      g +D+YV  ++ + + +++  +T  +k+ l+ +W+E +++++++++l
    KIAA1427   202    GGCDCYVQGSVAN-RTGsVEAQTALKKRQLHTTWEEGLVLPLAEEEL 247  

                   qe.tLeieVyDydrfgrddflGevs<-*
                      tL++++   drf+r+ + Ge +   
    KIAA1427   248 PTaTLTLTLRTCDRFSRHSVAGELR    272  

PF00168.20.fs: domain 2 of 2, from 317 to 407: score 64.3, E = 1.5e-18
                   *->LrVtvieAknLppkDkkng..ksDPYVkvylggdkkd.qkkkTkvik
                      L V +i+AknL+  + ++     D  Vkv+l  + ++ +kk+Tk +k
    KIAA1427   317    LLVVLIKAKNLHSNQ-SKEllGKDVSVKVTLKHQARKlKKKQTKRAK 362  

                   ktlNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                      NPvWNE+ +Fe+p++ lq +++e+eV   d  g    lG++s   
    KIAA1427   363 HKINPVWNEMIMFELPDDLLQAsSVELEVLGQDDSGQSCALGHCS    407  

PF00168.20.ls: domain 2 of 2, from 317 to 407: score 66.3, E = 9.4e-17
                   *->LrVtvieAknLppkDkkng..ksDPYVkvylggdkkd.qkkkTkvik
                      L V +i+AknL+  + ++     D  Vkv+l  + ++ +kk+Tk +k
    KIAA1427   317    LLVVLIKAKNLHSNQ-SKEllGKDVSVKVTLKHQARKlKKKQTKRAK 362  

                   ktlNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                      NPvWNE+ +Fe+p++ lq +++e+eV   d  g    lG++s   
    KIAA1427   363 HKINPVWNEMIMFELPDDLLQAsSVELEVLGQDDSGQSCALGHCS    407  

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