HUGE

Gene/Protein Characteristic Table for KIAA1430

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK01165
Accession No. :	AB037851
Description :
HUGO Gene Name :
Clone Name :	fj00020 [Vector Info]
Flexi ORF Clone :	pF1KA1430
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 4282 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 2696 bp

Genome contig ID gi89161207r_186218250
PolyA signal sequence
(AATAAA,-22)
+----*----+----*----+----*----+----
AGCTATTACTCCAAATAAAGTTCTTTGGTTTGCTT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAAATGTAGTGTAATGCAGTTGTTTTCTCTCCGCTAACCTGAGTGTCCA

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 4 r 186318250 186349331 4 99.3 Perfect prediction

Features of the protein sequence	Description

Length: 527 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
XP_001084789	8.9e-168	95.4	hypothetical pr...	Macaca mulatta
XP_001084669	3.9e-167	95.3	hypothetical pr...	Macaca mulatta
XP_001491159	1.3e-129	76.9	hypothetical pr...	Equus caballus
XP_001369037	1.4e-98	64.3	similar to hCG9...	Monodelphis dom...
XP_001925075	7.2e-97	72.5	hypothetical pr...	Sus scrofa

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: GTGGACCATTCTTTCTTTGAC

Primer_r
: GTTGTTTGCATTCCAGTGTTC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 4

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: GTGGACCATTCTTTCTTTGAC
Primer_r	: GTTGTTTGCATTCCAGTGTTC
PCR product length	: 146 bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	2696 bp
Genome contig ID	gi89161207r_186218250
PolyA signal sequence (AATAAA,-22)	+--------+--------+----*----+---- AGCTATTACTCCAAATAAAGTTCTTTGGTTTGCTT
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAAAATGTAGTGTAATGCAGTTGTTTTCTCTCCGCTAACCTGAGTGTCCA

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	4	r	186318250	186349331	4	99.3	Perfect prediction

Gene/Protein Characteristic Table for KIAA1430

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information