hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02523000/chunk_1/iprscan-20080502-02523000.nocrc
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Query sequence: KIAA1438
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00707                                                 128.5    7.2e-34   3
SM00513                                                  48.9    6.5e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00707    1/3     124   149 ..     1    26 []    39.4    5e-07
SM00707    2/3     168   193 ..     1    26 []    44.3  1.6e-08
SM00707    3/3     212   237 ..     1    26 []    44.8  1.1e-08
SM00513    1/1     491   525 ..     1    35 []    48.9  6.5e-10

Alignments of top-scoring domains:
SM00707: domain 1 of 3, from 124 to 149: score 39.4, E = 5e-07
                   *->drLkrKLsqRPtreELeernILkees<-*
                       +L++KL+qR+treEL++++I+++++   
    KIAA1438   124    NVLQLKLQQRRTREELVSQGIMPPLK    149  

SM00707: domain 2 of 3, from 168 to 193: score 44.3, E = 1.6e-08
                   *->drLkrKLsqRPtreELeernILkees<-*
                      d+LkrK++ RP+r+EL++++IL+e+s   
    KIAA1438   168    DYLKRKIRSRPERSELVRMHILEETS    193  

SM00707: domain 3 of 3, from 212 to 237: score 44.8, E = 1.1e-08
                   *->drLkrKLsqRPtreELeernILkees<-*
                      d+L++K+ qRP+++EL+e+nIL+ es   
    KIAA1438   212    DDLNEKIAQRPGPMELVEKNILPVES    237  

SM00513: domain 1 of 1, from 491 to 525: score 48.9, E = 6.5e-10
                   *->lskLkVseLkdeLkkrGLstsGrKaeLvkRLleal<-*
                      l  +kV+eLk+eLk r L++sG+K+eL++RL+++    
    KIAA1438   491    LDDMKVAELKQELKLRSLPVSGTKTELIERLRAYQ    525  

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