hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02591418/chunk_1/iprscan-20080502-02591418.nocrc
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Query sequence: KIAA1442
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01833.14.fs IPT/TIG domain                                  56.6      1e-15   1
PF01833.14.ls IPT/TIG domain                                  58.4    2.2e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01833.14.fs   1/1     339   421 ..     1   104 []    56.6    1e-15
PF01833.14.ls   1/1     339   421 ..     1   104 []    58.4  2.2e-14

Alignments of top-scoring domains:
PF01833.14.fs: domain 1 of 1, from 339 to 421: score 56.6, E = 1e-15
                   *->PvItsisPssgplsGGteiTitGsnlgsgsePrirkntfededikVt
                      P I +isP  g+++GG ++++ G+n++              ++++V+
    KIAA1442   339    PCIKAISPGEGWTTGGATVIVIGDNFF--------------DGLQVV 371  

                   fggtpvpCdvissssstqivCktPpva.ggpsppvvtvsvdgggsgdgrs
                   fg++ v++++i  ++   i++ tPp + +g ++  vt+s+++ +   +  
    KIAA1442   372 FGNVLVWSELITPHA---IRVQTPPRHiPGVVE--VTLSYKSKQ---FCK 413  

                   sspvtFtY<-*
                     p++F Y   
    KIAA1442   414 GCPGRFVY    421  

PF01833.14.ls: domain 1 of 1, from 339 to 421: score 58.4, E = 2.2e-14
                   *->PvItsisPssgplsGGteiTitGsnlgsgsePrirkntfededikVt
                      P I +isP  g+++GG ++++ G+n++              ++++V+
    KIAA1442   339    PCIKAISPGEGWTTGGATVIVIGDNFF--------------DGLQVV 371  

                   fggtpvpCdvissssstqivCktPpva.ggpsppvvtvsvdgggsgdgrs
                   fg++ v++++i  ++   i++ tPp + +g ++  vt+s+++ +   +  
    KIAA1442   372 FGNVLVWSELITPHA---IRVQTPPRHiPGVVE--VTLSYKSKQ---FCK 413  

                   sspvtFtY<-*
                     p++F Y   
    KIAA1442   414 GCPGRFVY    421  

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