hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02591418/chunk_1/iprscan-20080502-02591418.nocrc
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Query sequence: KIAA1442
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00429                                                  31.1    0.00015   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00429    1/1     338   422 ..     1   111 []    31.1  0.00015

Alignments of top-scoring domains:
SM00429: domain 1 of 1, from 338 to 422: score 31.1, E = 0.00015
                   *->dPvItrisPssGplsGGteritlcGknLdsdgsvvfvrvgvgGrvWe
                       P I +isP  G+  GG  ++ + G n+ +  +vvf+ v v+    +
    KIAA1442   338    TPCIKAISPGEGWTTGGA-TVIVIGDNFFDGLQVVFGNVLVW----S 379  

                   vpCtflpsdvhGkdsstaivCrtPpylnqspgpgsvpvrvtgevgfdngg
                   +  t+           +ai++ tPp + +  g+++v++++  + +   +g
    KIAA1442   380 ELITP-----------HAIRVQTPPRHIP--GVVEVTLSY--KSKQFCKG 414  

                   vrtelsppspFtYv<-*
                    ++      +F Y+   
    KIAA1442   415 CPG------RFVYT    422  

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