hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03023077/chunk_1/iprscan-20080502-03023077.nocrc
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Query sequence: KIAA1444
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                  70.2    2.6e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1       9    84 ..     1    80 []    70.2  2.6e-16

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 9 to 84: score 70.2, E = 2.6e-16
                   *->gglGfsivg........gifvssvvpGspAakaGrkslglLkvGDvI
                        lG+ +  +++++++ gi+v +v p+s Aak+Gr     +++GD+I
    KIAA1444     9    DKLGLMVCYrtddeedlGIYVGEVNPNSIAAKDGR-----IREGDRI 50   

                   leVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   +++NG ++v+    eeav++l +  +    + ++L+v R++   
    KIAA1444    51 IQING-VDVQ--NREEAVAILSQEEN----TNISLLVARPE    84   

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