hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03091475/chunk_1/iprscan-20080502-03091475.nocrc
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Query sequence: KIAA1448
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00225.13.ls Kinesin motor domain                           592.1   4.9e-175   1
PF00225.13.fs Kinesin motor domain                           590.4   1.6e-174   1
PF00498.16.fs FHA domain                                      50.7    2.3e-14   1
PF00498.16.ls FHA domain                                      52.4    1.4e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00225.13.fs   1/1      37   375 ..     1   424 []   590.4 1.6e-174
PF00225.13.ls   1/1      37   375 ..     1   424 []   592.1 4.9e-175
PF00498.16.fs   1/1     536   607 ..     1    94 []    50.7  2.3e-14
PF00498.16.ls   1/1     536   607 ..     1    94 []    52.4  1.4e-12

Alignments of top-scoring domains:
PF00225.13.fs: domain 1 of 1, from 37 to 375: score 590.4, E = 1.6e-174
                   *->RvRPlnerEksrgssdvvnv..sedvessvitn.gkektFtFDkVFd
                      RvRP+n+rE+s+ s++++++++ ++ ++++++ ++ +k+F+FD+ ++
    KIAA1448    37    RVRPFNSRETSKESKCIIQMqgNSTSIINPKNPkEAPKSFSFDYSYW 83   

                   peatQelse.p.YAsqefvyestakplvesvleGyNvtIFAYGQTGSGKT
                   ++++    e+p +Asq  vy++++k+++ +++eGyNv+IFAYGQTG+GK+
    KIAA1448    84 SHTSP---EdPcFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS 130  

                   YTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpv
                   YTM+G+ +               e+++GiiP  +e+lFe+i +++++   
    KIAA1448   131 YTMMGKQE---------------ESQAGIIPQLCEELFEKI-NDNCN--- 161  

                   fKPklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIY
                                                      e++++sv+vSy+EIY
    KIAA1448   162 -----------------------------------EEMSYSVEVSYMEIY 176  

                   NEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGL
                   +E++rDLL+p+             +k + Lr+re+p  G     +yV++L
    KIAA1448   177 CERVRDLLNPK-------------NKGN-LRVREHPLLG-----PYVEDL 207  

                   teveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntd
                   +   Vts+ ++ +l++ Gnk Rtva+T+mNe+SSRSHa+Fti+ +q+ +d
    KIAA1448   208 SKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKHD 257  

                   ttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaa
                   ++++ +t+         +vsk++LVDLAGSERa+ Tg   A g RLkE+a
    KIAA1448   258 NETNLSTE---------KVSKISLVDLAGSERADSTG---AKGTRLKEGA 295  

                   nINkSLsaLGnVInALadnq....kssHiPYRDSKLTrLLQDSLGGGDNs
                   nINkSL +LG+VI+ALa+ +++++k ++iPYRDS+LT+LL++ LGG  Ns
    KIAA1448   296 NINKSLTTLGKVISALAEVSkkkkKTDFIPYRDSVLTWLLRENLGG--NS 343  

                   KTlMIaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   +T+M+a +SP++     ny+ETLsTLr+A+RAK+Ik   
    KIAA1448   344 RTAMVAALSPADI----NYDETLSTLRYADRAKQIK    375  

PF00225.13.ls: domain 1 of 1, from 37 to 375: score 592.1, E = 4.9e-175
                   *->RvRPlnerEksrgssdvvnv..sedvessvitn.gkektFtFDkVFd
                      RvRP+n+rE+s+ s++++++++ ++ ++++++ ++ +k+F+FD+ ++
    KIAA1448    37    RVRPFNSRETSKESKCIIQMqgNSTSIINPKNPkEAPKSFSFDYSYW 83   

                   peatQelse.p.YAsqefvyestakplvesvleGyNvtIFAYGQTGSGKT
                   ++++    e+p +Asq  vy++++k+++ +++eGyNv+IFAYGQTG+GK+
    KIAA1448    84 SHTSP---EdPcFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS 130  

                   YTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpv
                   YTM+G+ +               e+++GiiP  +e+lFe+i +++++   
    KIAA1448   131 YTMMGKQE---------------ESQAGIIPQLCEELFEKI-NDNCN--- 161  

                   fKPklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIY
                                                      e++++sv+vSy+EIY
    KIAA1448   162 -----------------------------------EEMSYSVEVSYMEIY 176  

                   NEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGL
                   +E++rDLL+p+             +k + Lr+re+p  G     +yV++L
    KIAA1448   177 CERVRDLLNPK-------------NKGN-LRVREHPLLG-----PYVEDL 207  

                   teveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntd
                   +   Vts+ ++ +l++ Gnk Rtva+T+mNe+SSRSHa+Fti+ +q+ +d
    KIAA1448   208 SKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKHD 257  

                   ttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaa
                   ++++ +t+         +vsk++LVDLAGSERa+ Tg   A g RLkE+a
    KIAA1448   258 NETNLSTE---------KVSKISLVDLAGSERADSTG---AKGTRLKEGA 295  

                   nINkSLsaLGnVInALadnq....kssHiPYRDSKLTrLLQDSLGGGDNs
                   nINkSL +LG+VI+ALa+ +++++k ++iPYRDS+LT+LL++ LGG  Ns
    KIAA1448   296 NINKSLTTLGKVISALAEVSkkkkKTDFIPYRDSVLTWLLRENLGG--NS 343  

                   KTlMIaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   +T+M+a +SP++     ny+ETLsTLr+A+RAK+Ik   
    KIAA1448   344 RTAMVAALSPADI----NYDETLSTLRYADRAKQIK    375  

PF00498.16.fs: domain 1 of 1, from 536 to 607: score 50.7, E = 2.3e-14
                   *->vtiGRdsdsddilldddqdiqldg.siSrrHaeieykdggvglelaf
                      +++G        + ++ qdi+l+g +i  +H+ ++    + g ++  
    KIAA1448   536    TRVGQ------ADAERRQDIVLSGaHIKEEHCIFRSERSNSGEVIV- 575  

                   rpaqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-
                             +l++++ +     t+vNgkr+  ++pv+L+sG++i +G  
    KIAA1448   576 ----------TLEPCERSE----TYVNGKRV--SQPVQLRSGNRIIMG   607  

                   *
                    
    KIAA1448     -   -    

PF00498.16.ls: domain 1 of 1, from 536 to 607: score 52.4, E = 1.4e-12
                   *->vtiGRdsdsddilldddqdiqldg.siSrrHaeieykdggvglelaf
                      +++G        + ++ qdi+l+g +i  +H+ ++    + g ++  
    KIAA1448   536    TRVGQ------ADAERRQDIVLSGaHIKEEHCIFRSERSNSGEVIV- 575  

                   rpaqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-
                             +l++++ +     t+vNgkr+  ++pv+L+sG++i +G  
    KIAA1448   576 ----------TLEPCERSE----TYVNGKRV--SQPVQLRSGNRIIMG   607  

                   *
                    
    KIAA1448     -   -    

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