hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-03141215/chunk_1/iprscan-20080502-03141215.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1451 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00233 69.4 4.6e-16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00233 1/1 199 317 .. 1 82 [] 69.4 4.6e-16 Alignments of top-scoring domains: SM00233: domain 1 of 1, from 199 to 317: score 69.4, E = 4.6e-16 *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk...kpkgsipLsg +++ wL+++++++sw+k ++vL++gvLl+yk +++ g++ L+ KIAA1451 199 IVMADWLKIRGtLkSWTKLWCVLKPGVLLIYKTQkngQWVGTVLLNA 245 csvre.p......cFeivt.dr........................tlll c++ e+p+++++ cF+++++ +++ ++++++ ++ +++ +++ l++ KIAA1451 246 CEIIErPskkdgfCFKLFHpLEqsiwavkgpkgeavgsitqplpssYLII 295 qAeseeereeWvealqsaiaka<-* +A se++ ++W++al+ a++ + KIAA1451 296 RATSESDGRCWMDALELALKCS 317 //