hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03474719/chunk_1/iprscan-20080502-03474719.nocrc
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Query sequence: KIAA1471
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00194                                                 129.6    3.5e-34   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00194    1/1    1228  1421 .]     1   308 []   129.6  3.5e-34

Alignments of top-scoring domains:
SM00194: domain 1 of 1, from 1228 to 1421: score 129.6, E = 3.5e-34
                   *->gleeEferlqrltpddllsnfltdesctvanlpeNreseKNRYkcdi
                       l + + +lq+++ +d+       +s+ +a+ +      KNR++ d+
    KIAA1471  1228    ALDTVWRELQDAQEHDAR-----GRSIAIARCYS----LKNRHQ-DV 1264 

                   lpyDhtRVkLkppdgesdseegsDYINAnyidgy.kepkayIaTQGPLps
                   +pyD++RV+L +        + +DYINA+ ++g +++     aTQ+PLp+
    KIAA1471  1265 MPYDSNRVVLRS--------GKDDYINASCVEGLsPYCPPLVATQAPLPG 1306 

                   TveDFWrMVweqkvpvIVMLtnlvEkkterrkeggreKCaqYWPee...s
                   T +DFW MV eqkv+vIVML+++ E+         + K a+Y+P e++++
    KIAA1471  1307 TAADFWLMVHEQKVSVIVMLVSEAEM--------EKQKVARYFPTErgqP 1348 

                   ltyGditVtlvseeklpddytiRtlevtntgtekkdlkaksetrtVthyh
                   +++G +++ l s+ +++   + R+l++++ ++        s +r++ h+h
    KIAA1471  1349 MVHGALSLALSSVRSTE-THVERVLSLQFRDQ--------SLKRSLVHLH 1389 

                   ytnWPDhgvPespkslldfvrlvrksqssspnssenivssnskyagtsps
                   +++WP++g P+sp+ ll+f+++v++++ ++++                  
    KIAA1471  1390 FPTWPELGLPDSPSNLLRFIQEVHAHYLHQRP------------------ 1421 

                   gPivVHCSAGvGRTGTFiaidillqqleavdifdiVkelRsqRpgmVQTe
                                                                     
    KIAA1471     - -------------------------------------------------- -    

                   eQYiFlyraileylk<-*
                                     
    KIAA1471     - ---------------    -    

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