hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04074981/chunk_1/iprscan-20080502-04074981.nocrc
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Query sequence: KIAA1483
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.fs Zinc finger, C2H2 type                          80.4    5.2e-21   4
PF00096.16.ls Zinc finger, C2H2 type                          72.3    1.4e-18   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.fs   1/4     168   190 ..     1    24 []    27.9    1e-05
PF00096.16.ls   1/4     168   190 ..     1    24 []    29.9  8.2e-06
PF00096.16.fs   2/4     277   299 ..     1    24 []    28.1  9.4e-06
PF00096.16.ls   2/4     277   299 ..     1    24 []    30.1  7.4e-06

Alignments of top-scoring domains:
PF00096.16.fs: domain 1 of 4, from 168 to 190: score 27.9, E = 1e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y C+  Cg++F+ +s+L+ Hl++H   
    KIAA1483   168    YACH-LCGRRFTLRSSLREHLQIH    190  

PF00096.16.ls: domain 1 of 4, from 168 to 190: score 29.9, E = 8.2e-06
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y C+  Cg++F+ +s+L+ Hl++H   
    KIAA1483   168    YACH-LCGRRFTLRSSLREHLQIH    190  

PF00096.16.fs: domain 2 of 4, from 277 to 299: score 28.1, E = 9.4e-06
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y+C+ +Cg++F +ks+ + H+ +H   
    KIAA1483   277    YECT-ICGRKFIQKSHWREHMYIH    299  

PF00096.16.ls: domain 2 of 4, from 277 to 299: score 30.1, E = 7.4e-06
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y+C+ +Cg++F +ks+ + H+ +H   
    KIAA1483   277    YECT-ICGRKFIQKSHWREHMYIH    299  

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