hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04570826/chunk_1/iprscan-20080502-04570826.nocrc
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Query sequence: KIAA1511
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04434.8.fs SWIM zinc finger                                17.3    6.3e-05   1
PF04434.8.ls SWIM zinc finger                                19.2     0.0028   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04434.8.fs   1/1     287   324 ..     1    37 []    17.3  6.3e-05
PF04434.8.ls   1/1     287   324 ..     1    37 []    19.2   0.0028

Alignments of top-scoring domains:
PF04434.8.fs: domain 1 of 1, from 287 to 324: score 17.3, E = 6.3e-05
                   *->yrVqldld...lvkasCsCpdfqlygipCkHalAvllalg<-*
                      y V +++d+ ++   +C C++  ++ ++C H++A+ l+++   
    KIAA1511   287    YKVAISFDrckITSVTCGCGN--KDIFYCAHVVALSLYRI    324  

PF04434.8.ls: domain 1 of 1, from 287 to 324: score 19.2, E = 0.0028
                   *->yrVqldld...lvkasCsCpdfqlygipCkHalAvllalg<-*
                      y V +++d+ ++   +C C++  ++ ++C H++A+ l+++   
    KIAA1511   287    YKVAISFDrckITSVTCGCGN--KDIFYCAHVVALSLYRI    324  

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