hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04584583/chunk_1/iprscan-20080502-04584583.nocrc
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Query sequence: KIAA1512
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00242                                                1351.1          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00242    1/1     147   855 ..     1   771 []  1351.1        0

Alignments of top-scoring domains:
SM00242: domain 1 of 1, from 147 to 855: score 1351.1, E = 0
                   *->rnppkfegVeDmvlLtyLnEpavlhNLkkRYlkdlIYTYiGlvLvav
                      +npp f+  eDm+++t+LnE++vlhNL++RY++ +IYTY+Gl++v +
    KIAA1512   147    MNPPRFDLLEDMAMMTHLNEASVLHNLRQRYARWMIYTYSGLFCVTI 193  

                   NPYkqlppiYtdevikkYrekkdldGksrgElpPHvFAiADeAYrnMlre
                   NPYk l p+Yt +v+++Y+      Gk+r++ pPH++A+AD+AY++Mlr+
    KIAA1512   194 NPYKWL-PVYTASVVAAYK------GKRRSDSPPHIYAVADNAYNDMLRN 236  

                   keNQsIiISGESGAGKTEatKkimqYLAavsg...............sve
                   + NQs++I+GESGAGKT++tK+++qY+A v++ +++++++ +   ++ ++
    KIAA1512   237 RDNQSMLITGESGAGKTVNTKRVIQYFAIVAAlgdgpgkkaqflatkTGG 286  

                   svedqiLesNPiLEAFGNAKTvRNnNSSRFGKfieIhFdekGkivGAkIe
                   ++edqi+e+NP +EAFGNAKT+RN+NSSRFGKfi+IhF+ +Gk+  A+I 
    KIAA1512   287 TLEDQIIEANPAMEAFGNAKTLRNDNSSRFGKFIRIHFGPSGKLASADID 336  

                   nYLLEKSRVVsQakgERNYHIFYQLLaGaseelkkelgLskFSkspedYk
                    YLLEKSRV++Q +gER+YH+ YQ+L+G  +el + l+Ls    +p dY+
    KIAA1512   337 SYLLEKSRVIFQLPGERSYHVYYQILSGRKPELQDMLLLSM---NPYDYH 383  

                   YLnqggtpfankryssgcltvdgiDDaeeFkeTdEvtlkAmrvlGfseeE
                   + +qg             +tvd ++D ee  +Td+    Am++lGfs +E
    KIAA1512   384 FCSQG------------VITVDNMNDGEELIATDH----AMDILGFSVDE 417  

                   qesIFrilAAILHLGNieFeegrntgdnaavtslkvadeeelqkaAeLLg
                   + ++++i+ A+LH GN++F+++++  +++a++    +++e+++kaA+L+g
    KIAA1512   418 KCACYKIVGALLHFGNMKFKQKQR--EEQAEA----DGTESADKAAYLMG 461  

                   vdpeeLekaLtkRkiktggeggsvitkplnveqAvyaRDALAKaiYsRLF
                   v++ +L+k L+++++ +g+e   ++tk ++veq+v+a++ALAKa Y+RLF
    KIAA1512   462 VSSGDLLKGLLHPRVRVGNE---YVTKGQSVEQVVFAVGALAKATYDRLF 508  

                   dWLVkrINksl.....sayfIGVLDIyGFEiFekNSFEQfCINyaNEKLQ
                    WLV+rIN++l+++ +++ fIGVLDI+GFEiFe+NSFEQ+CIN++NEKLQ
    KIAA1512   509 RWLVSRINQTLdtklpRQFFIGVLDIAGFEIFEFNSFEQLCINFTNEKLQ 558  

                   QfFnqhvFKlEQEEYerEGIeWtfIdFfliDNQpciDLIEkKgkrPlGIl
                   QfFnqh+F+lEQEEY+rEGI+W fIdF+l D+QpciDLIEk+    lGIl
    KIAA1512   559 QFFNQHMFVLEQEEYKREGIDWVFIDFGL-DLQPCIDLIEKP----LGIL 603  

                   slLDEeClfHAqPkgTDqtFleKLnkalyhqhhkkhphfskprkSlkkgk
                   s+L+EeC+f   Pk++D++F +KL    y++h +k+p+f+ p       +
    KIAA1512   604 SILEEECMF---PKASDASFRAKL----YDNHAGKSPNFQQP-------R 639  

                   p.kkrfgrtaFiikHYAGdVtYnveGFLeKNkDtLfedlieLlqsSknpl
                   p+kkr+ +++F + HYAG V Y++ G+LeKNkD+L+e ++ ++q+S+n+l
    KIAA1512   640 PdKKRKYQAHFEVVHYAGVVPYSIVGWLEKNKDPLNETVVPIFQKSQNRL 689  

                   iasLFpeeadqsssaakekss.ggagksrkagrrepskgtisskkrppTv
                   +a+L + +a++  s+++ ks+ ++++k               + ++++Tv
    KIAA1512   690 LATLYENYAGSC-STEPPKSGvKEKRK---------------KAASFQTV 723  

                   GsqFk.sLneLmetLnstnPHFIRCIKPNeeKkpgvFdaslVlhQLrylG
                   ++++k+ Ln+Lm++L++t+PHF+RCI PNe+K pgv+da lVlhQLr++G
    KIAA1512   724 SQLHKeNLNKLMTNLRATQPHFVRCIVPNENKTPGVMDAFLVLHQLRCNG 773  

                   vLEniRIRraGFPyRlpfdeFlqRYkvLlpktwppwggewknrlfgdakk
                   vLE+iRI+r GFP+Rl +++F+qRY++L p+ +p          f+d +k
    KIAA1512   774 VLEGIRICRQGFPNRLLYTDFRQRYRILNPSAIPDDT-------FMDSRK 816  

                   acealLqslglgiegdnldeeeyqiGkTKvFlRnpgqlaeLEelRee<-*
                   a+e+lL sl        ld+ +yq+G+TKvF++ +g l+ LEelR++   
    KIAA1512   817 ATEKLLGSLD-------LDHTQYQFGHTKVFFK-AGLLGVLEELRDQ    855  

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