hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05002369/chunk_1/iprscan-20080502-05002369.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1513
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00349                                                  90.4    2.1e-22   1
SM00674                                                  86.2    4.1e-21   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00349     1/1      87   147 ..     1    62 []    90.4  2.1e-22
SM00674     1/1     296   363 ..     1    72 []    86.2  4.1e-21

Alignments of top-scoring domains:
SM00349: domain 1 of 1, from 87 to 147: score 90.4, E = 2.1e-22
                   *->VtFeDVAVdFsqEEWeqLDpaQrnLYRdVMlENYsnLvSLGgfqvsk
                        F+ VA++Fs EEWe L   Q++LYR+VM+ NY+++ SL+ f+++k
    KIAA1513    87    ALFDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLE-FPFPK 132  

                   pdliskLEqgeEpwi<-*
                   pd+i++LE +eE ++   
    KIAA1513   133 PDMITRLEGEEESQN    147  

SM00674: domain 1 of 1, from 296 to 363: score 86.2, E = 4.1e-21
                   *->rrkyallekaLyeWilraiqrakgipisgedirekAleilqelgeea
                      ++++al++++++e+++   ++akg pi++e ++ kAlei+qe++  +
    KIAA1513   296    NGRFALVDQRVAEYVRY--MQAKGDPITREAMQLKALEIAQEMN--I 338  

                   klenFkaSkgWldrFkkRhnivkrk<-*
                   ++ +FkaS gW+ r+++R+++++r+   
    KIAA1513   339 PEKGFKASLGWCRRMMRRYDLSLRH    363  

//