hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05203024/chunk_1/iprscan-20080502-05203024.nocrc
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Query sequence: KIAA1525
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00651.21.fs BTB/POZ domain                                  61.5    1.1e-16   3
PF00651.21.ls BTB/POZ domain                                  43.2    8.4e-10   2
PF07707.5.fs BTB And C-terminal Kelch                        26.9    1.3e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00651.21.fs   1/3     135   238 ..     1   126 [.    39.6  1.4e-10
PF00651.21.ls   1/2     135   241 ..     1   135 []    35.8  1.4e-07
PF00651.21.ls   2/2     243   400 ..     1   135 []     7.4  0.00081
PF00651.21.fs   2/3     274   295 ..    27    48 ..    18.5  0.00011
PF07707.5.fs   1/1     421   481 ..    16    77 ..    26.9  1.3e-06

Alignments of top-scoring domains:
PF00651.21.fs: domain 1 of 3, from 135 to 238: score 39.6, E = 1.4e-10
                   *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal
                      + +l++  ++c  + ++         +  f++H+a+Laa+ p+Fk+l
    KIAA1525   135    MADLYEY-KYCTDVDLIFQ-------ETCFPVHRAILAARCPFFKTL 173  

                   FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks
                   +++ +     e  ++++  i+  +++   f alL+++Ytge  ++ ++  
    KIAA1525   174 LSSSP-----EYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSR-- 216  

                   PssckseenvedlLaaAadllqipslvda<-*
                          +nv+ l ++  + +  p   d+   
    KIAA1525   217 ------FQNVDILVQLS-EEFGTPNSLDV    238  

PF00651.21.ls: domain 1 of 2, from 135 to 241: score 35.8, E = 1.4e-07
                   *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal
                      + +l++  ++c  + ++         +  f++H+a+Laa+ p+Fk+l
    KIAA1525   135    MADLYEY-KYCTDVDLIFQ-------ETCFPVHRAILAARCPFFKTL 173  

                   FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks
                   +++ +     e  ++++  i+  +++   f alL+++Ytge  ++ ++  
    KIAA1525   174 LSSSP-----EYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSR-- 216  

                   PssckseenvedlLaaAadllqipslvdaCeefliksl<-*
                          +nv+ l ++  + +  p       +  + +    
    KIAA1525   217 ------FQNVDILVQLS-EEFGTPN------SLDVDMR    241  

PF00651.21.ls: domain 2 of 2, from 243 to 400: score 7.4, E = 0.00081
                   *->lnelrkqgelcDVtLvvgdgsgr......yd.v.gkkfkAHKavLaa
                      l + ++     DV+L     s+  +  ++  +  ++++kAHKav +a
    KIAA1525   243    LFDYMCYY---DVVLSFSSDSELveafggNQnClDEELKAHKAVISA 286  

                   cSpYFkalFtgqfkesiteeessvs.......seieledvspedfealLe
                   +Sp+F++l+    +   t ee++ ++ +++++++++ + ++ +    +L+
    KIAA1525   287 RSPFFRNLLQRRIR---TGEEITDRtlrtptrIILDESIIPKKYATVILH 333  

                   fiYtgelsitqdqksPs..sc.k............seenvedlLaaAadl
                   ++Yt+ ++++    sPs +s ++ +    ++++ ++ e +++l ++A  +
    KIAA1525   334 CMYTDVVDLSVLHCSPSvgSLsEvqalvagkpnmtRAEEAMELYHIA-LF 382  

                   lqipslvdaCeefliksl<-*
                   l+  +l + Ce+ + +s+   
    KIAA1525   383 LEFNMLAQGCEDIIAESI    400  

PF00651.21.fs: domain 2 of 3, from 274 to 295: score 18.5, E = 0.00011
                   *->gkkfkAHKavLaacSpYFkalF<-*
                      ++++kAHKav +a+Sp+F++l+   
    KIAA1525   274    DEELKAHKAVISARSPFFRNLL    295  

PF07707.5.fs: domain 1 of 1, from 421 to 481: score 26.9, E = 1.3e-06
                   *->LaeaAdrfilqnFleVakseEFlqLskeqLielLssDeLnVpsEeeV
                      ++ +A+ f+++ F++V+ s+ F +Lsk++L++ ++sD L  +sE+++
    KIAA1525   421    VHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYL-QASEQDI 466  

                   feAvmrWvkhdvenR<-*
                   ++ +++W  h++ +R   
    KIAA1525   467 LKYLIKWGEHQLMKR    481  

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