hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05253116/chunk_1/iprscan-20080502-05253116.nocrc
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Query sequence: KIAA1528
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00678                                                 253.6    1.6e-71   2
SM00184                                                  31.7     0.0001   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00678    1/2     135   223 ..     1    84 []   132.9  3.3e-35
SM00678    2/2     225   300 ..     1    84 []   120.6  1.7e-31
SM00184    1/1     530   590 ..     1    23 []    31.7   0.0001

Alignments of top-scoring domains:
SM00678: domain 1 of 2, from 135 to 223: score 132.9, E = 3.3e-35
                   *->gkkvvWeyesrshggWwpYdprvskhIEdafarg.......kktcel
                      +++ vWe++++  g+W+pY+++v+ +IE++f ++++++ +   + ++
    KIAA1528   135    AAVAVWEWQDG-LGTWHPYSATVCSFIEQQFVQQkgqrfglGSLAHS 180  

                   silGqvD.sLrpYiiDfesmtQyrqdtgnrTtRkVrRvladpysa<-*
                   ++lGq+D+sL+pYiiD++s+tQ+rqdtg  T+R VrR+l++++sa   
    KIAA1528   181 IPLGQADpSLAPYIIDLPSWTQFRQDTG--TMRAVRRHLFPQHSA    223  

SM00678: domain 2 of 2, from 225 to 300: score 120.6, E = 1.7e-31
                   *->gkkvvWeyesrshggWwpYdprvskhIEdafargkktcelsilGqvD
                      g++vvWe++s+ +g+W++Y+++v++++E+++arg+++++l++lG   
    KIAA1528   225    GRGVVWEWLSD-DGSWTAYEASVCDYLEQQVARGNQLVDLAPLG--- 267  

                   sLrpYiiDfesmtQyrqdtgnrTtRkVrRvladpysa<-*
                     ++Y+++++++tQ+++++++  +R+VrR++ +py++   
    KIAA1528   268 --YNYTVNYTTHTQTNKTSSF--CRSVRRQAGPPYPV    300  

SM00184: domain 1 of 1, from 530 to 590: score 31.7, E = 0.0001
                   *->CpICle......................pvvlpCgH.FCr.Ci....
                      C IC+e+ +  ++ ++ ++++  ++     +++C H F+  C+    
    KIAA1528   530    CIICMEklsaasgysdvtdskaigslavGHLTKCSHaFHLlCLlamy 576  

                   ..........CPlC<-*
                    +++++++ +CP C   
    KIAA1528   577 cngnkdgslqCPSC    590  

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