hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05320507/chunk_1/iprscan-20080502-05320507.nocrc
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Query sequence: KIAA1532
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00730                                                 419.8   1.4e-121   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00730    1/1     226   501 ..     1   348 []   419.8 1.4e-121

Alignments of top-scoring domains:
SM00730: domain 1 of 1, from 226 to 501: score 419.8, E = 1.4e-121
                   *->ldsllnslvaivfiivatvvLvlLYkfrkflsKeykvivlwiifssl
                      + +++++++++vf+++++++LvlLY+f++      +v+v+++if+++
    KIAA1532   226    EAVDVTPVMTCVFVVMCCSMLVLLYYFYD-----LLVYVVIGIFCLA 267  

                   gvlflysllyplevfktyfllpfrpcgwpqkpikfpfcgg.k.meeGkke
                   ++ +lys+l+p++++     lpf++c+       +p++++++ ++     
    KIAA1532   268 SATGLYSCLAPCVRR-----LPFGKCR-------IPNNSLpYfHK----- 300  

                   invpvdyitllilllnfgvvgvwcihrkg..laWiqqdligisllmalvf
                      ++++++ll++l++++v +vw ++r+++++aW +qd++gi++++++++
    KIAA1532   301 ---RPQARMLLLALFCVAVSVVWGVFRNEdqWAWVLQDALGIAFCLYMLK 347  

                   ilrLPsGewtawiLLgaLfiYDifaVfgtpyifkGPlrvMVevAqgrnep
                   + rLP+ ++++++LL++Lf+YDif+Vf+tp+++k+++++MVevA+g++++
    KIAA1532   348 TIRLPT-FKACTLLLLVLFLYDIFFVFITPFLTKSGSSIMVEVATGPSDS 396  

                   alpvklvfPallyssrmvwavgqrnmadsslgaeqstreeRraveeessl
                   a+  ++++P++l+++r++                                
    KIAA1532   397 AT--REKLPMVLKVPRLN-------------------------------- 412  

                   eprlgntraeaelsalsdeeerfsmLGLGDivfPGlLVakaarfdsysqk
                               +s+l++++++fs LG+GDi +PGlLVa+++rfd  +q+
    KIAA1532   413 ------------SSPLALCDRPFSLLGFGDILVPGLLVAYCHRFD--IQV 448  

                   rsdlnyflacfvAyliGLllTlvlLavfkkGrAqPALpYlvpftLvfyfl
                   +s++ yf+ac++Ay++GLl+T+v+La++++  +qPAL+Ylvp+tLv+ ++
    KIAA1532   449 QSSRVYFVACTIAYGVGLLVTFVALALMQR--GQPALLYLVPCTLVTSCA 496  

                   tallr<-*
                   +al+r   
    KIAA1532   497 VALWR    501  

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