hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05351892/chunk_1/iprscan-20080502-05351892.nocrc
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Query sequence: KIAA1534
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01237.9.fs Oxysterol-binding protein                  229.3    7.6e-66   1
PF01237.9.ls Oxysterol-binding protein                  199.6    6.6e-57   1
PF00169.19.fs PH domain                                   52.1    2.1e-15   1
PF00169.19.ls PH domain                                   54.1    4.2e-13   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF00169.19.fs   1/1     113   229 ..     1    92 []    52.1  2.1e-15
PF00169.19.ls   1/1     113   229 ..     1    92 []    54.1  4.2e-13
PF01237.9.ls   1/1     324   740 ..     1   440 []   199.6  6.6e-57
PF01237.9.fs   1/1     363   682 ..    45   376 ..   229.3  7.6e-66

Alignments of top-scoring domains:
PF00169.19.fs: domain 1 of 1, from 113 to 229: score 52.1, E = 2.1e-15
                   *->vikeGwLlkkggkkswkkRyfvLfddvLlyykdkk.kkpkgsipLsg
                      vi+   L+ +g +ksw k ++vL+++vLl+yk +k    +g++ L  
    KIAA1534   113    VIMADSLKIRGTLKSWTKLWCVLKPGVLLIYKTPKvGQWVGTVLLHC 159  

                   iqvtkvpdnkrkncFeirt.dr.......................etlll
                   +++ + p+ k+ +cF++ ++  ++    +++++++ ++ +++ ++  l++
    KIAA1534   160 CELIERPSKKDGFCFKLFHpLDqsvwavkgpkgesvgsitqplpsSYLIF 209  

                   qaeseeerkeWvkaiqsair<-*
                   +a+se + + W++a++ a+r   
    KIAA1534   210 RAASESDGRCWLDALELALR    229  

PF00169.19.ls: domain 1 of 1, from 113 to 229: score 54.1, E = 4.2e-13
                   *->vikeGwLlkkggkkswkkRyfvLfddvLlyykdkk.kkpkgsipLsg
                      vi+   L+ +g +ksw k ++vL+++vLl+yk +k    +g++ L  
    KIAA1534   113    VIMADSLKIRGTLKSWTKLWCVLKPGVLLIYKTPKvGQWVGTVLLHC 159  

                   iqvtkvpdnkrkncFeirt.dr.......................etlll
                   +++ + p+ k+ +cF++ ++  ++    +++++++ ++ +++ ++  l++
    KIAA1534   160 CELIERPSKKDGFCFKLFHpLDqsvwavkgpkgesvgsitqplpsSYLIF 209  

                   qaeseeerkeWvkaiqsair<-*
                   +a+se + + W++a++ a+r   
    KIAA1534   210 RAASESDGRCWLDALELALR    229  

PF01237.9.ls: domain 1 of 1, from 324 to 740: score 199.6, E = 6.6e-57
                   *->kSqhsSsssltsklkfilsepkdltrRldipeeslspisLwsisqlw
                      + +    ++  ++l   ++   ++t       e + ++  +   ql+
    KIAA1534   324    RRGTTYVEQVQEELGELGEASQVETV-----SEENKSLMWTLLKQLR 365  

                   vGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrWfly
                   +G dLs+  lP+f +Ep S L  +++    ++lL++Aa +ed+  r +  
    KIAA1534   366 PGMDLSRVVLPTFVLEPRSFLNKLSDYYYHADLLSRAAVEEDAYSR-MKL 414  

                   vaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyrllsEQV
                   v++++ls++  +++  kKP NP+LGEtF   +     +    +++++EQV
    KIAA1534   415 VLRWYLSGFYKKPKGIKKPYNPILGETFRCCWFHPQTDS--RTFYIAEQV 462  

                   SHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhtildi
                   SHHPPvsAf+  + k    ++g ++ ks+F G+sl++  +G   +t+l  
    KIAA1534   463 SHHPPVSAFHVSNRKDGFCISGSITAKSRFYGNSLSALLDGKATLTFLNR 512  

                   kdingkpEtYtwtqPnttveGILvGkpfvElSGdesvin.sstGdkcvIe
                            Yt+t P  + +GIL G +  El G++  i   ++ +++ +e
    KIAA1534   513 AE------DYTLTMPYAHCKGILYGTMTLEL-GGKVTIEcAKNNFQAQLE 555  

                   FktkGyf..SGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikKv
                   Fk k +f++S   +++ g+i    +g    E +l  lsG+W+  + ik  
    KIAA1534   556 FKLKPFFggSTSINQISGKIT---SG----EEVLASLSGHWDRDVFIKEE 598  

                   qsksegelflD...ahktphealkvrpLeeqhelesrkaWkkvadalkvg
                    s  ++ lf  +++  ++  ++  + pLeeq eles ++W  v++a+ +g
    KIAA1534   599 GS-GSSALFWTpsgEVRRQRLRQHTVPLEEQTELESERLWQHVTRAISKG 647  

                   nltvftktkneleerqRpllkptesrgvedqralfkrledkedldkeekk
                   +   +t++k++lee qR+ ++++++ + ++ + lf  l++     ++e+ 
    KIAA1534   648 DQHRATQEKFALEEAQRQRARERQESLMPWKPQLFH-LDPI----TQEWH 692  

                   ekpeaddkerkqk.gslyepkwfvpsgqpvtdKeklyikarkeyWefrKk
                      e+  + + +k+ +  e   +++  q+      +  ++ ++ + + + 
    KIAA1534   693 YRYEDHSPWDPLKdIAQFEQDGILRTLQQEA--VARQTTFLGSPGPRHER 740  

                   <-*
                      
    KIAA1534     -     -    

PF01237.9.fs: domain 1 of 1, from 363 to 682: score 229.3, E = 7.6e-66
                   *->qlwvGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsl
                      ql++G dLs+  lP+f +Ep S L  +++    ++lL++Aa +ed+ 
    KIAA1534   363    QLRPGMDLSRVVLPTFVLEPRSFLNKLSDYYYHADLLSRAAVEEDAY 409  

                   trWflyvaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyr
                    r +  v++++ls++  +++  kKP NP+LGEtF   +     +    ++
    KIAA1534   410 SR-MKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCCWFHPQTDS--RTF 456  

                   llsEQVSHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltv
                   +++EQVSHHPPvsAf+  + k    ++g ++ ks+F G+sl++  +G   
    KIAA1534   457 YIAEQVSHHPPVSAFHVSNRKDGFCISGSITAKSRFYGNSLSALLDGKAT 506  

                   htildikdingkpEtYtwtqPnttveGILvGkpfvElSGdesvin.sstG
                   +t+l           Yt+t P  + +GIL G +  El G++  i   ++ 
    KIAA1534   507 LTFLNRAE------DYTLTMPYAHCKGILYGTMTLEL-GGKVTIEcAKNN 549  

                   dkcvIeFktkGyf..SGkkdsfkgrivkdpdgnkdKEkklytlsGkWnds
                   +++ +eFk k +f++S   +++ g+i    +g    E +l  lsG+W+  
    KIAA1534   550 FQAQLEFKLKPFFggSTSINQISGKIT---SG----EEVLASLSGHWDRD 592  

                   myikKvqsksegelflD...ahktphealkvrpLeeqhelesrkaWkkva
                   + ik   s  ++ lf  +++  ++  ++  + pLeeq eles ++W  v+
    KIAA1534   593 VFIKEEGS-GSSALFWTpsgEVRRQRLRQHTVPLEEQTELESERLWQHVT 641  

                   dalkvgnltvftktkneleerqRpllkptesrgvedqralf<-*
                   +a+ +g+   +t++k++lee qR+ ++++++ + ++ + lf   
    KIAA1534   642 RAISKGDQHRATQEKFALEEAQRQRARERQESLMPWKPQLF    682  

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