hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05351892/chunk_1/iprscan-20080502-05351892.nocrc
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Query sequence: KIAA1534
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  64.6    1.2e-14   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1     113   231 ..     1    82 []    64.6  1.2e-14

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 113 to 231: score 64.6, E = 1.2e-14
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk...kpkgsipLsg
                      vi+   L+++++++sw+k ++vL++gvLl+yk ++ +   g++ L  
    KIAA1534   113    VIMADSLKIRGtLkSWTKLWCVLKPGVLLIYKTPkvgQWVGTVLLHC 159  

                   csvre.p......cFeivt.dr........................tlll
                   c++ e+p+++++ cF+++++  ++    +++++++ ++ +++ +++ l++
    KIAA1534   160 CELIErPskkdgfCFKLFHpLDqsvwavkgpkgesvgsitqplpssYLIF 209  

                   qAeseeereeWvealqsaiaka<-*
                   +A se++ ++W++al+ a++ +   
    KIAA1534   210 RAASESDGRCWLDALELALRCS    231  

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