hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05365944/chunk_1/iprscan-20080502-05365944.nocrc
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Query sequence: KIAA1535
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00100                                                  83.2    3.2e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00100    1/1     365   478 ..     1   123 []    83.2  3.2e-20

Alignments of top-scoring domains:
SM00100: domain 1 of 1, from 365 to 478: score 83.2, E = 3.2e-20
                   *->lfkaldaeelreladalepvrypaGevifrqGdpgdsfYiivsGeve
                      lf+++d+++ ++++ +l+ +++++G+ ++r+G +g  +Y+i +G + 
    KIAA1535   365    LFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLS 411  

                   vyktrlstledgreqilatlgpGdfFGElall.rrarsaaavalvelatl
                   v+++         +   ++l+ G++FGE++ll+r +r+a+++a  ++++l
    KIAA1535   412 VLAR---------GARDTRLTDGSYFGEICLLtRGRRTASVRAD-TYCRL 451  

                   lridferflqllpenpqlllelllell<-*
                     ++ ++f   l+e+p++ +++        
    KIAA1535   452 YSLSVDHFNAVLEEFPMMRRAFETVAM    478  

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