hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-06313962/chunk_1/iprscan-20080502-06313962.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1567 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF02171.8.ls Piwi domain 468.6 7.3e-138 1 PF02171.8.fs Piwi domain 466.7 2.7e-137 1 PF02170.12.fs PAZ domain 184.6 1.1e-53 1 PF02170.12.ls PAZ domain 186.4 6.3e-53 1 PF08699.1.fs Domain of unknown function (DUF1785) 84.9 6e-23 1 PF08699.1.ls Domain of unknown function (DUF1785) 86.8 6.2e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF08699.1.fs 1/1 228 280 .. 1 60 [] 84.9 6e-23 PF08699.1.ls 1/1 228 280 .. 1 60 [] 86.8 6.2e-23 PF02170.12.fs 1/1 288 424 .. 1 160 [] 184.6 1.1e-53 PF02170.12.ls 1/1 288 424 .. 1 160 [] 186.4 6.3e-53 PF02171.8.fs 1/1 572 883 .. 1 338 [] 466.7 2.7e-137 PF02171.8.ls 1/1 572 883 .. 1 338 [] 468.6 7.3e-138 Alignments of top-scoring domains: PF08699.1.fs: domain 1 of 1, from 228 to 280: score 84.9, E = 6e-23 *->lavgrSFhFspslggglekrdLggGleEawrGFyqSfRpTqNgGLPs ++vgrSF Fsp+ g +LggG e +w GF+qS+Rp+ + + + KIAA1567 228 TPVGRSF-FSPPEGY---YHPLGGGRE-VWFGFHQSVRPAM-WNM-M 267 LNvDvSttaFykp<-* LN+DvS+taFy++ KIAA1567 268 LNIDVSATAFYRA 280 PF08699.1.ls: domain 1 of 1, from 228 to 280: score 86.8, E = 6.2e-23 *->lavgrSFhFspslggglekrdLggGleEawrGFyqSfRpTqNgGLPs ++vgrSF Fsp+ g +LggG e +w GF+qS+Rp+ + + + KIAA1567 228 TPVGRSF-FSPPEGY---YHPLGGGRE-VWFGFHQSVRPAM-WNM-M 267 LNvDvSttaFykp<-* LN+DvS+taFy++ KIAA1567 268 LNIDVSATAFYRA 280 PF02170.12.fs: domain 1 of 1, from 288 to 424: score 184.6, E = 1.1e-53 *->qpvldfltdiltqrtrlgsdfqeeermfikkaLkGliVlttynnnkq ++vld +++i +q ++l ++++ + ++k+++Gl+V++t+++++ KIAA1567 288 CEVLD-IQNINEQTKPLTDSQRVK----FTKEIRGLKVEVTHCGQM- 328 pkerrtYrIdgisfdptpnstFplkrddeegegdgkeisvaeYykekYni +r+Yr++ ++ +p++++tFpl+ +++g+ e++va+Y+k+kY + KIAA1567 329 ---KRKYRVCNVTRRPASHQTFPLQ----LENGQAMECTVAQYFKQKYSL 371 elkypnlPllvvgkkkrrlnlgtpreqpnyLPpELCfitggqrymrkdfn +lkyp+lP+l+vg++++ ++yLP+E+C+i+ gqr+++k+++ KIAA1567 372 QLKYPHLPCLQVGQEQK----------HTYLPLEVCNIVAGQRCIKKLTD 411 lqksiaiktrasp<-* +q+s++ik++a++ KIAA1567 412 NQTSTMIKATARS 424 PF02170.12.ls: domain 1 of 1, from 288 to 424: score 186.4, E = 6.3e-53 *->qpvldfltdiltqrtrlgsdfqeeermfikkaLkGliVlttynnnkq ++vld +++i +q ++l ++++ + ++k+++Gl+V++t+++++ KIAA1567 288 CEVLD-IQNINEQTKPLTDSQRVK----FTKEIRGLKVEVTHCGQM- 328 pkerrtYrIdgisfdptpnstFplkrddeegegdgkeisvaeYykekYni +r+Yr++ ++ +p++++tFpl+ +++g+ e++va+Y+k+kY + KIAA1567 329 ---KRKYRVCNVTRRPASHQTFPLQ----LENGQAMECTVAQYFKQKYSL 371 elkypnlPllvvgkkkrrlnlgtpreqpnyLPpELCfitggqrymrkdfn +lkyp+lP+l+vg++++ ++yLP+E+C+i+ gqr+++k+++ KIAA1567 372 QLKYPHLPCLQVGQEQK----------HTYLPLEVCNIVAGQRCIKKLTD 411 lqksiaiktrasp<-* +q+s++ik++a++ KIAA1567 412 NQTSTMIKATARS 424 PF02171.8.fs: domain 1 of 1, from 572 to 883: score 466.7, E = 2.7e-137 *->livvvlpddkkedldkflYdeiKkleltdlgipsQcvllktlkkrsk livv+lp +k++ Y e+K++++t lg+ +Qcv+ k+++k s+ KIAA1567 572 LIVVILP-GKTPV-----YAEVKRVGDTLLGMATQCVQVKNVVKTSP 612 qGgrltltNvilKtNmKlGGlNyklndekeprckVCNemrviplkptlii q tl N++lK+N+KlGG+N +l++ +p ++ +p++++ KIAA1567 613 Q----TLSNLCLKINAKLGGINNVLVPHQRPS---------VFQQPVIFL 649 GfDvshppArTkfDrenggrlnnpsvagvvasmdsphgtkfrgdvrlqpa G Dv+hp ++g++++ps+a+vv+smd h++++ ++vr+q + KIAA1567 650 GADVTHP---------PAGDGKKPSIAAVVGSMDG-HPSRYCATVRVQTS 689 gqElltdlkk.........giiresLrsfykntrkkkPkrIivYRDGvSE +qE ++l ++++ ++ + ++re+L++fyk+tr kP rIi+YR GvSE KIAA1567 690 RQEISQELLYsqeviqdltNMVRELLIQFYKSTR-FKPTRIIYYRGGVSE 738 GqfsqvlnyEvnqikeackklsesyqeqePkltvIvvqKrHhtRfFasdk Gq +qv E+ +i++ac +l+e+y+ P +t+IvvqKrHhtR+F++dk KIAA1567 739 GQMKQVAWPELIAIRKACISLEEDYR---PGITYIVVQKRHHTRLFCADK 785 rdggskakaqNvpPGTvVDdkitspeyydFylcsqagrqGTvkPthYtVl ++ ++k++Nvp GT+VD++it+p ++dFylcs+ag+qGT++P hY Vl KIAA1567 786 TER--VGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVL 833 yDdiglspdelqdLTykLCymyqrvtrpvslPaPvyYAhllAkrgrnnlk +Dd+ +++delq LTy+LC++y r+tr+vs+PaP+yYA l+A+r+r++l+ KIAA1567 834 WDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLV 883 <-* KIAA1567 - - PF02171.8.ls: domain 1 of 1, from 572 to 883: score 468.6, E = 7.3e-138 *->livvvlpddkkedldkflYdeiKkleltdlgipsQcvllktlkkrsk livv+lp +k++ Y e+K++++t lg+ +Qcv+ k+++k s+ KIAA1567 572 LIVVILP-GKTPV-----YAEVKRVGDTLLGMATQCVQVKNVVKTSP 612 qGgrltltNvilKtNmKlGGlNyklndekeprckVCNemrviplkptlii q tl N++lK+N+KlGG+N +l++ +p ++ +p++++ KIAA1567 613 Q----TLSNLCLKINAKLGGINNVLVPHQRPS---------VFQQPVIFL 649 GfDvshppArTkfDrenggrlnnpsvagvvasmdsphgtkfrgdvrlqpa G Dv+hp ++g++++ps+a+vv+smd h++++ ++vr+q + KIAA1567 650 GADVTHP---------PAGDGKKPSIAAVVGSMDG-HPSRYCATVRVQTS 689 gqElltdlkk.........giiresLrsfykntrkkkPkrIivYRDGvSE +qE ++l ++++ ++ + ++re+L++fyk+tr kP rIi+YR GvSE KIAA1567 690 RQEISQELLYsqeviqdltNMVRELLIQFYKSTR-FKPTRIIYYRGGVSE 738 GqfsqvlnyEvnqikeackklsesyqeqePkltvIvvqKrHhtRfFasdk Gq +qv E+ +i++ac +l+e+y+ P +t+IvvqKrHhtR+F++dk KIAA1567 739 GQMKQVAWPELIAIRKACISLEEDYR---PGITYIVVQKRHHTRLFCADK 785 rdggskakaqNvpPGTvVDdkitspeyydFylcsqagrqGTvkPthYtVl ++ ++k++Nvp GT+VD++it+p ++dFylcs+ag+qGT++P hY Vl KIAA1567 786 TER--VGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVL 833 yDdiglspdelqdLTykLCymyqrvtrpvslPaPvyYAhllAkrgrnnlk +Dd+ +++delq LTy+LC++y r+tr+vs+PaP+yYA l+A+r+r++l+ KIAA1567 834 WDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLV 883 <-* KIAA1567 - 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