hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06545919/chunk_1/iprscan-20080502-06545919.nocrc
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Query sequence: KIAA1581
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07260.2.ls Progressive ankylosis protein (ANKH)          1455.0          0   1
PF07260.2.fs Progressive ankylosis protein (ANKH)          1453.1          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07260.2.fs   1/1      54   545 .]     1   495 []  1453.1        0
PF07260.2.ls   1/1      54   545 .]     1   495 []  1455.0        0

Alignments of top-scoring domains:
PF07260.2.fs: domain 1 of 1, from 54 to 545: score 1453.1, E = 0
                   *->mkkFPALtHYWPLiRFLvPLaitniAiDlGEqALnRGiAAvKEDAvE
                      m+kFPALtHYWPLiRFLvPL+itniAiD+GEqALnRGiAAvKEDAvE
    KIAA1581    54    MVKFPALTHYWPLIRFLVPLGITNIAIDFGEQALNRGIAAVKEDAVE 100  

                   mLAsYGLAYsLmKFFaGPmsDFKnvGLvFvnsKRDRaKAvLCmvvAGavA
                   mLAsYGLAYsLmKFF+GPmsDFKnvGLvFvnsKRDR+KAvLCmvvAGa+A
    KIAA1581   101 MLASYGLAYSLMKFFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIA 150  

                   ivFHtLiAYsdLGYYiinKLHHvDEsvGsKtRkAFLYLAAFPllDAmAWt
                   +vFHtLiAYsdLGYYiinKLHHvDEsvGsKtR+AFLYLAAFP++DAmAWt
    KIAA1581   151 AVFHTLIAYSDLGYYIINKLHHVDESVGSKTRRAFLYLAAFPFMDAMAWT 200  

                   HAGiLLKHKyslLvGCAsisDvvAqvvFvaiLLHsHLECvEPlLiPiLsL
                   HAGiLLKHKys+LvGCAsisDv+AqvvFvaiLLHsHLEC+EPlLiPiLsL
    KIAA1581   201 HAGILLKHKYSFLVGCASISDVIAQVVFVAILLHSHLECREPLLIPILSL 250  

                   YmGALvRftilgLGYYkviHDiiPersGPElGGDAtikKmLsFWWPLALi
                   YmGALvR+t+l+LGYYk+iHDiiP+rsGPElGGDAti+KmLsFWWPLALi
    KIAA1581   251 YMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSFWWPLALI 300  

                   LAtqRisRPivnLFvsRDLkGssAAtEAvAvLtAtYPvGHmPYGWLtElR
                   LAtqRisRPivnLFvsRDL+GssAAtEAvA+LtAtYPvGHmPYGWLtE+R
    KIAA1581   301 LATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIR 350  

                   AvYPAFDKnnPsnKLinsntvvtkaHiKkFtFvClALsltLCFvvFWaPn
                   AvYPAFDKnnPsnKL+ + ++vt aHiKkFtFvC+ALsltLCFv+FW+Pn
    KIAA1581   351 AVYPAFDKNNPSNKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFWTPN 400  

                   vsEkiLvDiiGvDfAFAELCviPLRiFsFFPvPvtvRAHLtGWLmtLKKt
                   vsEkiL+DiiGvDfAFAELCv+PLRiFsFFPvPvtvRAHLtGWLmtLKKt
    KIAA1581   401 VSEKILIDIIGVDFAFAELCVVPLRIFSFFPVPVTVRAHLTGWLMTLKKT 450  

                   FvLAPssvLRiivLissLvvLPYlGvHGAtLGvGsLLAGFlGEstmvAlA
                   FvLAPssvLRiivLi+sLvvLPYlGvHGAtLGvGsLLAGF+GEstmvA+A
    KIAA1581   451 FVLAPSSVLRIIVLIASLVVLPYLGVHGATLGVGSLLAGFVGESTMVAIA 500  

                   ACYvYRKqKKKkeseedmaieGEDsApmtevrsaervdDivElREEdE<-
                   ACYvYRKqKKK+e+e+  a+eGEDsA mt++++ e+v+DivE+REE+E  
    KIAA1581   501 ACYVYRKQKKKMENES--ATEGEDSA-MTDMPPTEEVTDIVEMREENE   545  

                   *
                    
    KIAA1581     -   -    

PF07260.2.ls: domain 1 of 1, from 54 to 545: score 1455.0, E = 0
                   *->mkkFPALtHYWPLiRFLvPLaitniAiDlGEqALnRGiAAvKEDAvE
                      m+kFPALtHYWPLiRFLvPL+itniAiD+GEqALnRGiAAvKEDAvE
    KIAA1581    54    MVKFPALTHYWPLIRFLVPLGITNIAIDFGEQALNRGIAAVKEDAVE 100  

                   mLAsYGLAYsLmKFFaGPmsDFKnvGLvFvnsKRDRaKAvLCmvvAGavA
                   mLAsYGLAYsLmKFF+GPmsDFKnvGLvFvnsKRDR+KAvLCmvvAGa+A
    KIAA1581   101 MLASYGLAYSLMKFFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIA 150  

                   ivFHtLiAYsdLGYYiinKLHHvDEsvGsKtRkAFLYLAAFPllDAmAWt
                   +vFHtLiAYsdLGYYiinKLHHvDEsvGsKtR+AFLYLAAFP++DAmAWt
    KIAA1581   151 AVFHTLIAYSDLGYYIINKLHHVDESVGSKTRRAFLYLAAFPFMDAMAWT 200  

                   HAGiLLKHKyslLvGCAsisDvvAqvvFvaiLLHsHLECvEPlLiPiLsL
                   HAGiLLKHKys+LvGCAsisDv+AqvvFvaiLLHsHLEC+EPlLiPiLsL
    KIAA1581   201 HAGILLKHKYSFLVGCASISDVIAQVVFVAILLHSHLECREPLLIPILSL 250  

                   YmGALvRftilgLGYYkviHDiiPersGPElGGDAtikKmLsFWWPLALi
                   YmGALvR+t+l+LGYYk+iHDiiP+rsGPElGGDAti+KmLsFWWPLALi
    KIAA1581   251 YMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSFWWPLALI 300  

                   LAtqRisRPivnLFvsRDLkGssAAtEAvAvLtAtYPvGHmPYGWLtElR
                   LAtqRisRPivnLFvsRDL+GssAAtEAvA+LtAtYPvGHmPYGWLtE+R
    KIAA1581   301 LATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIR 350  

                   AvYPAFDKnnPsnKLinsntvvtkaHiKkFtFvClALsltLCFvvFWaPn
                   AvYPAFDKnnPsnKL+ + ++vt aHiKkFtFvC+ALsltLCFv+FW+Pn
    KIAA1581   351 AVYPAFDKNNPSNKLVSTSNTVTAAHIKKFTFVCMALSLTLCFVMFWTPN 400  

                   vsEkiLvDiiGvDfAFAELCviPLRiFsFFPvPvtvRAHLtGWLmtLKKt
                   vsEkiL+DiiGvDfAFAELCv+PLRiFsFFPvPvtvRAHLtGWLmtLKKt
    KIAA1581   401 VSEKILIDIIGVDFAFAELCVVPLRIFSFFPVPVTVRAHLTGWLMTLKKT 450  

                   FvLAPssvLRiivLissLvvLPYlGvHGAtLGvGsLLAGFlGEstmvAlA
                   FvLAPssvLRiivLi+sLvvLPYlGvHGAtLGvGsLLAGF+GEstmvA+A
    KIAA1581   451 FVLAPSSVLRIIVLIASLVVLPYLGVHGATLGVGSLLAGFVGESTMVAIA 500  

                   ACYvYRKqKKKkeseedmaieGEDsApmtevrsaervdDivElREEdE<-
                   ACYvYRKqKKK+e+e+  a+eGEDsA mt++++ e+v+DivE+REE+E  
    KIAA1581   501 ACYVYRKQKKKMENES--ATEGEDSA-MTDMPPTEEVTDIVEMREENE   545  

                   *
                    
    KIAA1581     -   -    

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