hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07100594/chunk_1/iprscan-20080502-07100594.nocrc
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Query sequence: KIAA1590
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00225.13.ls Kinesin motor domain                           564.6   9.2e-167   1
PF00225.13.fs Kinesin motor domain                           562.9   2.9e-166   1
PF00498.16.fs FHA domain                                      42.2    7.1e-12   1
PF00498.16.ls FHA domain                                      43.9      5e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00225.13.fs   1/1      10   360 ..     1   424 []   562.9 2.9e-166
PF00225.13.ls   1/1      10   360 ..     1   424 []   564.6 9.2e-167
PF00498.16.fs   1/1     479   545 ..     1    94 []    42.2  7.1e-12
PF00498.16.ls   1/1     479   545 ..     1    94 []    43.9    5e-10

Alignments of top-scoring domains:
PF00225.13.fs: domain 1 of 1, from 10 to 360: score 562.9, E = 2.9e-166
                   *->RvRPlnerEksrgssdvvnv..........sedvessvitn.gkekt
                      RvRP+n rEk   +++++++++++++ ++    + +  ++ ++++kt
    KIAA1590    10    RVRPMNRREKDLEAKFIIQMekskttitnlKIPEGGTGDSGrERTKT 56   

                   FtFDkVFdpeatQelse.p.YAsqefvyestakplvesvleGyNvtIFAY
                   Ft+D  F +++t     +p+Y sqe v+ +++ ++v+s++eGyN+++FAY
    KIAA1590    57 FTYDFSFYSADT----KsPdYVSQEMVFKTLGTDVVKSAFEGYNACVFAY 102  

                   GQTGSGKTYTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerie
                   GQTGSGK+YTM+G++                ++  G+iPR++e lF+ri+
    KIAA1590   103 GQTGSGKSYTMMGNSG---------------DS--GLIPRICEGLFSRIN 135  

                   erkerkpvfKPklnekgwellncqetligvsfdtrglsSdlyvedlefsv
                   e++ r            w                          + +f+ 
    KIAA1590   136 ETT-R------------WD-------------------------EASFRT 147  

                   kvSylEIYNEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkm
                   +vSylEIYNE++rDLL  +          ++k+ +  Lr+re+pk+G   
    KIAA1590   148 EVSYLEIYNERVRDLLRRK----------SSKTFN--LRVREHPKEG--- 182  

                   dgvyVkGLteveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFti
                     +yV++L+ + V+++ +v el++ Gn nRt+a+T mN+ SSRSHaiFti
    KIAA1590   183 --PYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTI 230  

                   tveqrntdttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAg
                   + +q   d++++++t           vsk++LVDLAGSERa+ Tgat  g
    KIAA1590   231 KFTQAKFDSEMPCET-----------VSKIHLVDLAGSERADATGAT--G 267  

                   grRLkEaanINkSLsaLGnVInALadnq..........kssHiPYRDSKL
                    r LkE++nINkSL +LGnVI+ALad +++  ++  ++k+ ++PYRDS+L
    KIAA1590   268 VR-LKEGGNINKSLVTLGNVISALADLSqdaantlakkKQVFVPYRDSVL 316  

                   TrLLQDSLGGGDNsKTlMIaniSPsssrNntnyeETLsTLrFAsRAKnIk
                   T+LL+DSLGG  NsKT+MIa+iSP++     ny ETLsTLr+A+RAKnI 
    KIAA1590   317 TWLLKDSLGG--NSKTIMIATISPADV----NYGETLSTLRYANRAKNII 360  

                   <-*
                      
    KIAA1590     -     -    

PF00225.13.ls: domain 1 of 1, from 10 to 360: score 564.6, E = 9.2e-167
                   *->RvRPlnerEksrgssdvvnv..........sedvessvitn.gkekt
                      RvRP+n rEk   +++++++++++++ ++    + +  ++ ++++kt
    KIAA1590    10    RVRPMNRREKDLEAKFIIQMekskttitnlKIPEGGTGDSGrERTKT 56   

                   FtFDkVFdpeatQelse.p.YAsqefvyestakplvesvleGyNvtIFAY
                   Ft+D  F +++t     +p+Y sqe v+ +++ ++v+s++eGyN+++FAY
    KIAA1590    57 FTYDFSFYSADT----KsPdYVSQEMVFKTLGTDVVKSAFEGYNACVFAY 102  

                   GQTGSGKTYTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerie
                   GQTGSGK+YTM+G++                ++  G+iPR++e lF+ri+
    KIAA1590   103 GQTGSGKSYTMMGNSG---------------DS--GLIPRICEGLFSRIN 135  

                   erkerkpvfKPklnekgwellncqetligvsfdtrglsSdlyvedlefsv
                   e++ r            w                          + +f+ 
    KIAA1590   136 ETT-R------------WD-------------------------EASFRT 147  

                   kvSylEIYNEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkm
                   +vSylEIYNE++rDLL  +          ++k+ +  Lr+re+pk+G   
    KIAA1590   148 EVSYLEIYNERVRDLLRRK----------SSKTFN--LRVREHPKEG--- 182  

                   dgvyVkGLteveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFti
                     +yV++L+ + V+++ +v el++ Gn nRt+a+T mN+ SSRSHaiFti
    KIAA1590   183 --PYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTI 230  

                   tveqrntdttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAg
                   + +q   d++++++t           vsk++LVDLAGSERa+ Tgat  g
    KIAA1590   231 KFTQAKFDSEMPCET-----------VSKIHLVDLAGSERADATGAT--G 267  

                   grRLkEaanINkSLsaLGnVInALadnq..........kssHiPYRDSKL
                    r LkE++nINkSL +LGnVI+ALad +++  ++  ++k+ ++PYRDS+L
    KIAA1590   268 VR-LKEGGNINKSLVTLGNVISALADLSqdaantlakkKQVFVPYRDSVL 316  

                   TrLLQDSLGGGDNsKTlMIaniSPsssrNntnyeETLsTLrFAsRAKnIk
                   T+LL+DSLGG  NsKT+MIa+iSP++     ny ETLsTLr+A+RAKnI 
    KIAA1590   317 TWLLKDSLGG--NSKTIMIATISPADV----NYGETLSTLRYANRAKNII 360  

                   <-*
                      
    KIAA1590     -     -    

PF00498.16.fs: domain 1 of 1, from 479 to 545: score 42.2, E = 7.1e-12
                   *->vtiGRdsdsddilldddqdiqldg.siSrrHaeieykdggvglelaf
                      + +GR       +   +qdi+l+g  +  +H+ +e+ +g+v      
    KIAA1590   479    TYVGR------DDASTEQDIVLHGlDLESEHCIFENIGGTV------ 513  

                   rpaqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-
                             +l++ls++     ++vNg+++   e + L++G+vi+lG  
    KIAA1590   514 ----------TLIPLSGSQ----CSVNGVQI--VEATHLNQGAVILLG   545  

                   *
                    
    KIAA1590     -   -    

PF00498.16.ls: domain 1 of 1, from 479 to 545: score 43.9, E = 5e-10
                   *->vtiGRdsdsddilldddqdiqldg.siSrrHaeieykdggvglelaf
                      + +GR       +   +qdi+l+g  +  +H+ +e+ +g+v      
    KIAA1590   479    TYVGR------DDASTEQDIVLHGlDLESEHCIFENIGGTV------ 513  

                   rpaqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-
                             +l++ls++     ++vNg+++   e + L++G+vi+lG  
    KIAA1590   514 ----------TLIPLSGSQ----CSVNGVQI--VEATHLNQGAVILLG   545  

                   *
                    
    KIAA1590     -   -    

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