hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07581691/chunk_1/iprscan-20080502-07581691.nocrc
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Query sequence: KIAA1619
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 570.9     5e-167   1
SM00423                                                  53.3    3.2e-11   1
SM00409                                                  34.2    1.8e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1      82   515 ..     1   532 []   570.9   5e-167
SM00423    1/1     533   589 ..     1    56 []    53.3  3.2e-11
SM00409    1/1     600   682 ..     1    58 []    34.2  1.8e-05

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 82 to 515: score 570.9, E = 5e-167
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      +++lll e+s   rl+VGAr +++sLs++++   +     ++++w++
    KIAA1619    82    YSTLLLEEASA--RLLVGARGALFSLSANDIGDGA----HKEIHWEA 122  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                   ++e      ++++C +kgk    +n+teC+N++r+L++ n     thLy+
    KIAA1619   123 SPE------MQSKCHQKGK----NNQTECFNHVRFLQRLNS----THLYA 158  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CGT+af+P  +C+ i+ +              +tl+        +e+g+ 
    KIAA1619   159 CGTHAFQP--LCAAIDAEA-------------FTLPT------SFEEGKE 187  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   kCPydP+  +t++++dg       LY++t+++f+        s p i Rs
    KIAA1619   188 KCPYDPARGFTGLIIDG------GLYTATRYEFR--------SIPDIRRS 223  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipes.g....dg
                             + hslrt++++ +w   ln++ FV ++ ++es+++  +d+
    KIAA1619   224 R---------HPHSLRTEETPMHW---LNDAEFVFSVLVRESkAsavgDD 261  

                   dfVYFFFrEtaveainr..dcssekavvsRVARvCknDvGGqrlLqkkWt
                   d+VY+FF+E+a+e ++++ ++s +++ v+RVARvCk+D GG+++LqkkWt
    KIAA1619   262 DKVYYFFTERATEEGSGsfTQSRSSHRVARVARVCKGDLGGKKILQKKWT 311  

                   SFLKarLnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYg
                   SFLKarL+C++p         +  L++v+ l +    ++ +    + +Y+
    KIAA1619   312 SFLKARLICHIP--------LYETLRGVCSLDA----ETSS---RTHFYA 346  

                   VFsqgqqtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawl
                   +F+ + q+       ++  SA+C ++l++I+avF  Gp+++y+ + ++w+
    KIAA1619   347 AFTLSTQW------KTLEASAICRYDLAEIQAVFA-GPYMEYQDGSRRWG 389  

                   pvegnkvPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeav
                   ++eg +vP+prPG+Ci++++r+ +++ ss+dlP  vl f+k hpLm ++v
    KIAA1619   390 RYEG-GVPEPRPGSCITDSLRS-QGYNSSQDLPSLVLDFVKLHPLMARPV 437  

                   pPltgrPllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlK
                    P +grPll k+  + r+T+++ ++v+ + G +  y+ lFlGT+dG+++K
    KIAA1619   438 VPTRGRPLLLKR--NIRYTHLTGTPVTTPAGPT--YDLLFLGTADGWIHK 483  

                   vvvsrsssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   +vv +s          ++++ee qvf+++ + + ++v+s  +   
    KIAA1619   484 AVVLGS---------GMHIIEETQVFRES-QSVENLVISLLQ    515  

SM00423: domain 1 of 1, from 533 to 589: score 53.3, E = 3.2e-11
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrg.....erCderrg
                       Cs+y  +sC +C+lardpy CgW++++++C ++++  + + ++r++
    KIAA1619   533    SCSRY--RSCYDCILARDPY-CGWDPGTHACAAAttianRSQGSRTA 576  

                   srqnwssgpssqCp<-*
                   ++q++++ ++++C    
    KIAA1619   577 LIQDIER-GNRGCE    589  

SM00409: domain 1 of 1, from 600 to 682: score 34.2, E = 1.8e-05
                   *->pp.vtvkeGesvtLtC.as....titWy...................
                       ++ +v +G++v L+C+ +++  +  W+ +++ + ++++++ + + +
    KIAA1619   600    LKtRSVLRGDDVLLPCdQPsnlaRALWLlngsmglsdgqggyrvgvd 646  

                   .LtI.nvtpeDsesgGtYtCaat...sgsasseqgttLtVl<-*
                   +L +++++pe+s   G+Y C a+ ++  +  +  +  LtV+   
    KIAA1619   647 gLLVtDAQPEHS---GNYGCYAEengLRTLLA--SYSLTVR    682  

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