hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08272109/chunk_1/iprscan-20080502-08272109.nocrc
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Query sequence: KIAA1636
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 178.0    9.1e-49  11
SM00028                                                  61.1    1.5e-13   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/11    720   752 ..     1    30 []     0.8  3.7e+03
SM00248    2/11    756   787 ..     1    30 []     7.1  5.2e+02
SM00248    3/11    791   820 ..     1    30 []    20.0     0.34
SM00248    4/11    824   853 ..     1    30 []    11.1  1.5e+02
SM00248    5/11    864   892 ..     1    30 []     2.7  2.1e+03
SM00248    6/11    907   936 ..     1    30 []    19.1     0.61
SM00248    7/11    940   969 ..     1    30 []    21.3     0.14
SM00248    8/11    973  1002 ..     1    30 []    31.6  0.00011
SM00248    9/11   1006  1035 ..     1    30 []    24.4    0.016
SM00248   10/11   1039  1068 ..     1    30 []    31.7  9.8e-05
SM00248   11/11   1072  1101 ..     1    30 []     8.2  3.7e+02
SM00028    1/3    1118  1151 ..     1    34 []     8.7       52
SM00028    2/3    1165  1198 ..     1    34 []    22.8    0.049
SM00028    3/3    1199  1232 ..     1    34 []    29.6  0.00042

Alignments of top-scoring domains:
SM00248: domain 1 of 11, from 720 to 752: score 0.8, E = 3.7e+03
                   *->dGrTpLHlAaen...gnlevvklLldkgadina<-*
                      +G +      +n  + n++v +lL+  ga+in+   
    KIAA1636   720    EGLSMALASLRNlytPNIKVSRLLILGGANINY    752  

SM00248: domain 2 of 11, from 756 to 787: score 7.1, E = 5.2e+02
                   *->dGrTpLHlAaen..gnlevvklLldkgadina<-*
                        +++  l+++++ g+ e+v lLl+ ga+++a   
    KIAA1636   756    VLNNAPILCVQShlGYTEMVALLLEFGANVDA    787  

SM00248: domain 3 of 11, from 791 to 820: score 20.0, E = 0.34
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G TpL +Aa+ g+l++v lL +k a ++    
    KIAA1636   791    SGLTPLGYAAAAGYLSIVVLLCKKRAKVDH    820  

SM00248: domain 4 of 11, from 824 to 853: score 11.1, E = 1.5e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+ +L +Aa +g+levvk+L++ + ++     
    KIAA1636   824    NGQCALVHAALRGHLEVVKFLIQCDWTMAG    853  

SM00248: domain 5 of 11, from 864 to 892: score 2.7, E = 2.1e+03
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                        + +L  Aa+ g+ e+v +Lld   + ++   
    KIAA1636   864    AIQQALIAAASMGYTEIVSYLLDLP-EKDE    892  

SM00248: domain 6 of 11, from 907 to 936: score 19.1, E = 0.61
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G T+L  Aa +g lev++lLl+ ga +     
    KIAA1636   907    WGETALTAAAGRGKLEVCRLLLEQGAAVAQ    936  

SM00248: domain 7 of 11, from 940 to 969: score 21.3, E = 0.14
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G  pL   ++ g+  +v lLl +gad+n+   
    KIAA1636   940    RGAVPLFSTVRQGHWQIVDLLLTHGADVNM    969  

SM00248: domain 8 of 11, from 973 to 1002: score 31.6, E = 0.00011
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +GrTpL++Aa++g+l +v +Ll  ga+i +   
    KIAA1636   973    QGRTPLMMAASEGHLGTVDFLLAQGASIAL    1002 

SM00248: domain 9 of 11, from 1006 to 1035: score 24.4, E = 0.016
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G T+L +A+ +g+l+vv+ L+d+ga  +    
    KIAA1636  1006    EGLTALSWACLKGHLSVVRSLVDNGAATDH    1035 

SM00248: domain 10 of 11, from 1039 to 1068: score 31.7, E = 9.8e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +GrTpL lAa +g+ evv++L+d+ga i+    
    KIAA1636  1039    NGRTPLDLAAFYGDAEVVQFLVDHGAMIEH    1068 

SM00248: domain 11 of 11, from 1072 to 1101: score 8.2, E = 3.7e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+ pL  A+   n +vv  Ll+kga i     
    KIAA1636  1072    SGMRPLDRAVGCRNTSVVVTLLKKGAKIGP    1101 

SM00028: domain 1 of 3, from 1118 to 1151: score 8.7, E = 52
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                         l   G +++k+g+ +eA + y+ AL+  P     
    KIAA1636  1118    LSKLMEEGDMFYKKGKVKEAAQRYQYALKKFPRE    1151 

SM00028: domain 2 of 3, from 1165 to 1198: score 22.8, E = 0.049
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +  l+nl  + +k++d+ +A+e+ +kALel P+    
    KIAA1636  1165    VSLLLNLSRCRRKMNDFGMAEEFATKALELKPKS    1198 

SM00028: domain 3 of 3, from 1199 to 1232: score 29.6, E = 0.00042
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +ea+y ++ a ++  +++ A+e++++A++l Pnn   
    KIAA1636  1199    YEAYYARARAKRSSRQFAAALEDLNEAIKLCPNN    1232 

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