hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08304735/chunk_1/iprscan-20080502-08304735.nocrc
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Query sequence: KIAA1638
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00637.10.fs Region in Clathrin and VPS                      27.3    3.7e-07   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00637.10.fs   3/3     568   636 ..    84   156 .]    20.8  2.4e-05

Alignments of top-scoring domains:
PF00637.10.fs: domain 3 of 3, from 568 to 636: score 20.8, E = 2.4e-05
                   *->rlcekaklyFweeAfllykkDlsnfkdaivtlielieagnyqravdy
                      + +++a+ + ++eA+++y++  + + ++i  ++++   +n+++av++
    KIAA1638   568    AKAKEADGR-YKEAVVAYEN-AKQWQSVIRIYLDHL--NNPEKAVNI 610  

                   avkrnnpelwaevlkacldkkrflla<-*
                   +++ ++ +  + v+ ++l++  +  a   
    KIAA1638   611 VRETQSLDGAKMVARFFLQLGDYGSA    636  

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