HUGE

Gene/Protein Characteristic Table for KIAA1648

Link to : GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05685
Accession No. :	AB051435
Description :	Tetratricopeptide repeat protein 28.
HUGO Gene Name :
Clone Name :	fg05002 [Vector Info]
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 5851 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 4458 bp

Genome contig ID gi89161203f_26618457
PolyA signal sequence
(AATAAA,-9)
+----*----+----*----+----*----+----
GGAAACAGGGAATTTAAATAAAGGGAAATAAAAGT
Flanking genome sequence
(116114 - 116163)
----+----*----+----*----+----*----+----*----+----*
AAGGATAACAGAGACTCTATAACTAGAGCAAGTCTAAACTCCAAGGATCC

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 22 f 26718457 26734569 5 99.0 Perfect prediction

Features of the protein sequence	Description

Length: 112 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
CAH92435	7.7e-35	94.6	hypothetical pr...	Pongo abelii

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 22

Experimental conditions

Panel name	: genbank
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	4458 bp
Genome contig ID	gi89161203f_26618457
PolyA signal sequence (AATAAA,-9)	+--------+--------+----*----+---- GGAAACAGGGAATTTAAATAAAGGGAAATAAAAGT
Flanking genome sequence (116114 - 116163)	----+--------+--------+--------+--------+----* AAGGATAACAGAGACTCTATAACTAGAGCAAGTCTAAACTCCAAGGATCC

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	22	f	26718457	26734569	5	99.0	Perfect prediction

Gene/Protein Characteristic Table for KIAA1648

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information