hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09134471/chunk_1/iprscan-20080502-09134471.nocrc
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Query sequence: KIAA1664
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01237.9.ls Oxysterol-binding protein                  506.2   3.4e-149   1
PF01237.9.fs Oxysterol-binding protein                  504.2   1.3e-148   1
PF00169.19.fs PH domain                                   76.5    8.2e-23   1
PF00169.19.ls PH domain                                   78.4    2.1e-20   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF00169.19.fs   1/1     187   278 ..     1    92 []    76.5  8.2e-23
PF00169.19.ls   1/1     187   278 ..     1    92 []    78.4  2.1e-20
PF01237.9.fs   1/1     488   910 ..     1   440 []   504.2 1.3e-148
PF01237.9.ls   1/1     488   910 ..     1   440 []   506.2 3.4e-149

Alignments of top-scoring domains:
PF00169.19.fs: domain 1 of 1, from 187 to 278: score 76.5, E = 8.2e-23
                   *->vikeGwLlkkg.gkkswkkRyfvLfddvLlyykdkk...kkpkgsip
                         eGwLlk+++++k++++R+fvL ++ L+yy++ ++  ++++g+i+
    KIAA1664   187    DSFEGWLLKWTnYLKGYQRRWFVLGNGLLSYYRNQGemaHTCRGTIN 233  

                   LsgiqvtkvpdnkrkncFeirt.dretlllqaeseeerkeWvkaiqsair
                   Ls++ +++ ++    +++ ++++ r +++l+a+se +r++W++a++ a +
    KIAA1664   234 LSTAHIDTEDS----CGILLTSgAR-SYHLKASSEVDRQQWITALELAKA 278  

                   <-*
                      
    KIAA1664     -     -    

PF00169.19.ls: domain 1 of 1, from 187 to 278: score 78.4, E = 2.1e-20
                   *->vikeGwLlkkg.gkkswkkRyfvLfddvLlyykdkk...kkpkgsip
                         eGwLlk+++++k++++R+fvL ++ L+yy++ ++  ++++g+i+
    KIAA1664   187    DSFEGWLLKWTnYLKGYQRRWFVLGNGLLSYYRNQGemaHTCRGTIN 233  

                   LsgiqvtkvpdnkrkncFeirt.dretlllqaeseeerkeWvkaiqsair
                   Ls++ +++ ++    +++ ++++ r +++l+a+se +r++W++a++ a +
    KIAA1664   234 LSTAHIDTEDS----CGILLTSgAR-SYHLKASSEVDRQQWITALELAKA 278  

                   <-*
                      
    KIAA1664     -     -    

PF01237.9.fs: domain 1 of 1, from 488 to 910: score 504.2, E = 1.3e-148
                   *->kSqhsSsssltsklkfilsepkdltrRldipeeslspisLwsisqlw
                      +   sS    +  ++ +     +++rR +ip +++++++Lwsi++++
    KIAA1664   488    SVDWSSADNVLDGASLVPKGSSKVKRRVRIPNKPNYSLNLWSIMKNC 534  

                   vGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrWfly
                   +G +Ls+i++Pv++nEp+SmLqr+tedleY++lLdkA+ +  s+++ ++ 
    KIAA1664   535 IGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVHCTSSVEQ-MCL 583  

                   vaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyrllsEQV
                   vaa+ +ssys+t+ r  KP+NP+LGEtFel+r++   ++    r+l+EQV
    KIAA1664   584 VAAFSVSSYSTTVHRIAKPFNPMLGETFELDRLD--DMG---LRSLCEQV 628  

                   SHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhtildi
                   SHHPP +A++ +s+ + w++ +e++i+skF+Gk++++m++G  +h+ + +
    KIAA1664   629 SHHPPSAAHYVFSKHG-WSLWQEITISSKFRGKYISIMPLGA-IHLEFQA 676  

                   kdingkpEtYtwtqPnttveGILvGkpfvElSGdesvinsstGdkcvIeF
                    +      +Y+w + + tv++I+vGk+++++SGd+ ++n++t d c ++F
    KIAA1664   677 SG-----NHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTNDRCQLKF 721  

                   ktkGyfSGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikKvqsk
                    +++yfS  ++++++++v d++g     k++y+lsG W++ m++ Kv   
    KIAA1664   722 LPYSYFSKEAARKVTGVVSDSQG-----KAHYVLSGSWDEQMECSKVMHS 766  

                   segelflDahktphealkvrpLeeqhelesrkaWkkvadalkvgnltvft
                   s +    D  + +   + + +L++++ +++ +a++++++++++++l+  +
    KIAA1664   767 SPSSPSSDGKQKTVYQTLSAKLLWKKYPLPENAENMYYFSELALTLNEHE 816  

                   ktkneleerqRpllkptesrgvedqralfkrledkedldkeekkekp...
                   ++ +++++r+Rp+++++e +++++++ +++rle+k+ +++++ ++ + ++
    KIAA1664   817 EGVAPTDSRLRPDQRLMEKGRWDEANTEKQRLEEKQ-RLSRRRRLEAcgp 865  

                   .eaddkerkqkgslyepkwfvpsgqpvtdKeklyikarkeyWefrKk<-*
                   ++    e++   + y p+wf++  +p t   +   ++ + yWe ++k   
    KIAA1664   866 gSSCSSEEEKEADAYTPLWFEKRLDPLT--GEMACVYKGGYWEAKEK    910  

PF01237.9.ls: domain 1 of 1, from 488 to 910: score 506.2, E = 3.4e-149
                   *->kSqhsSsssltsklkfilsepkdltrRldipeeslspisLwsisqlw
                      +   sS    +  ++ +     +++rR +ip +++++++Lwsi++++
    KIAA1664   488    SVDWSSADNVLDGASLVPKGSSKVKRRVRIPNKPNYSLNLWSIMKNC 534  

                   vGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrWfly
                   +G +Ls+i++Pv++nEp+SmLqr+tedleY++lLdkA+ +  s+++ ++ 
    KIAA1664   535 IGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVHCTSSVEQ-MCL 583  

                   vaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyrllsEQV
                   vaa+ +ssys+t+ r  KP+NP+LGEtFel+r++   ++    r+l+EQV
    KIAA1664   584 VAAFSVSSYSTTVHRIAKPFNPMLGETFELDRLD--DMG---LRSLCEQV 628  

                   SHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhtildi
                   SHHPP +A++ +s+ + w++ +e++i+skF+Gk++++m++G  +h+ + +
    KIAA1664   629 SHHPPSAAHYVFSKHG-WSLWQEITISSKFRGKYISIMPLGA-IHLEFQA 676  

                   kdingkpEtYtwtqPnttveGILvGkpfvElSGdesvinsstGdkcvIeF
                    +      +Y+w + + tv++I+vGk+++++SGd+ ++n++t d c ++F
    KIAA1664   677 SG-----NHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTNDRCQLKF 721  

                   ktkGyfSGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikKvqsk
                    +++yfS  ++++++++v d++g     k++y+lsG W++ m++ Kv   
    KIAA1664   722 LPYSYFSKEAARKVTGVVSDSQG-----KAHYVLSGSWDEQMECSKVMHS 766  

                   segelflDahktphealkvrpLeeqhelesrkaWkkvadalkvgnltvft
                   s +    D  + +   + + +L++++ +++ +a++++++++++++l+  +
    KIAA1664   767 SPSSPSSDGKQKTVYQTLSAKLLWKKYPLPENAENMYYFSELALTLNEHE 816  

                   ktkneleerqRpllkptesrgvedqralfkrledkedldkeekkekp...
                   ++ +++++r+Rp+++++e +++++++ +++rle+k+ +++++ ++ + ++
    KIAA1664   817 EGVAPTDSRLRPDQRLMEKGRWDEANTEKQRLEEKQ-RLSRRRRLEAcgp 865  

                   .eaddkerkqkgslyepkwfvpsgqpvtdKeklyikarkeyWefrKk<-*
                   ++    e++   + y p+wf++  +p t   +   ++ + yWe ++k   
    KIAA1664   866 gSSCSSEEEKEADAYTPLWFEKRLDPLT--GEMACVYKGGYWEAKEK    910  

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