hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-09522042/chunk_1/iprscan-20080502-09522042.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1687 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF01344.15.ls Kelch motif 334.4 1.8e-97 6 PF01344.15.fs Kelch motif 330.8 2.2e-96 6 PF07707.5.ls BTB And C-terminal Kelch 171.8 1.6e-48 1 PF07707.5.fs BTB And C-terminal Kelch 169.8 6.3e-48 1 PF07646.5.ls Kelch motif 140.6 3.9e-39 5 PF00651.21.ls BTB/POZ domain 133.8 4.5e-37 1 PF00651.21.fs BTB/POZ domain 132.0 1.5e-36 1 PF07646.5.fs Kelch motif 131.2 2.7e-36 5 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00651.21.fs 1/1 182 289 .. 1 135 [] 132.0 1.5e-36 PF00651.21.ls 1/1 182 289 .. 1 135 [] 133.8 4.5e-37 PF07707.5.ls 1/1 294 395 .. 1 103 [] 171.8 1.6e-48 PF07707.5.fs 1/1 294 395 .. 1 103 [] 169.8 6.3e-48 PF01344.15.ls 1/6 429 473 .. 1 45 [] 22.6 0.0013 PF01344.15.fs 1/6 439 473 .. 12 45 .] 29.1 2e-07 PF01344.15.fs 2/6 475 520 .. 1 45 [] 66.6 4.3e-18 PF07646.5.ls 1/5 475 520 .. 1 54 [] 32.9 1e-06 PF01344.15.ls 2/6 475 520 .. 1 45 [] 68.6 1.9e-17 PF07646.5.fs 1/5 475 520 .. 1 54 [] 31.0 1.4e-07 PF01344.15.fs 3/6 522 567 .. 1 45 [] 57.5 1.6e-15 PF07646.5.ls 2/5 522 567 .. 1 54 [] 22.8 0.0011 PF07646.5.fs 2/5 522 567 .. 1 54 [] 20.9 7.8e-05 PF01344.15.ls 3/6 522 567 .. 1 45 [] 59.5 9.9e-15 PF07646.5.ls 3/5 569 614 .. 1 54 [] 30.1 7.2e-06 PF01344.15.fs 4/6 569 614 .. 1 45 [] 67.3 2.7e-18 PF01344.15.ls 4/6 569 614 .. 1 45 [] 69.3 1.1e-17 PF07646.5.fs 3/5 569 614 .. 1 54 [] 28.2 8.1e-07 PF01344.15.fs 5/6 616 667 .. 1 45 [] 55.7 5.5e-15 PF07646.5.fs 4/5 616 667 .. 1 54 [] 22.1 3.7e-05 PF01344.15.ls 5/6 616 667 .. 1 45 [] 57.7 3.6e-14 PF07646.5.ls 4/5 616 667 .. 1 54 [] 24.1 0.00046 PF07646.5.fs 5/5 669 714 .. 1 54 [] 28.8 5.6e-07 PF01344.15.fs 6/6 669 714 .. 1 45 [] 54.6 1.1e-14 PF01344.15.ls 6/6 669 714 .. 1 45 [] 56.6 7.5e-14 PF07646.5.ls 5/5 669 714 .. 1 54 [] 30.7 4.8e-06 Alignments of top-scoring domains: PF00651.21.fs: domain 1 of 1, from 182 to 289: score 132.0, E = 1.5e-36 *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal +++ +k+++lcDV L +g + +++AH++vL+a S+YF a+ KIAA1687 182 MENYLKEKQLCDVLLIAG--------HLRIPAHRLVLSAVSDYFAAM 220 FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks Ft++ e++++ e+ +e+v+p ++ l++++Ytg l+++ KIAA1687 221 FTND------VLEAKQE-EVRMEGVDPNALNSLVQYAYTGVLQLK----- 258 PssckseenvedlLaaAadllqipslvdaCeefliksl<-* e+++e+lLaaA +llq+ ++d+C +flik+l KIAA1687 259 ------EDTIESLLAAA-CLLQLTQVIDVCSNFLIKQL 289 PF00651.21.ls: domain 1 of 1, from 182 to 289: score 133.8, E = 4.5e-37 *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal +++ +k+++lcDV L +g + +++AH++vL+a S+YF a+ KIAA1687 182 MENYLKEKQLCDVLLIAG--------HLRIPAHRLVLSAVSDYFAAM 220 FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks Ft++ e++++ e+ +e+v+p ++ l++++Ytg l+++ KIAA1687 221 FTND------VLEAKQE-EVRMEGVDPNALNSLVQYAYTGVLQLK----- 258 PssckseenvedlLaaAadllqipslvdaCeefliksl<-* e+++e+lLaaA +llq+ ++d+C +flik+l KIAA1687 259 ------EDTIESLLAAA-CLLQLTQVIDVCSNFLIKQL 289 PF07707.5.ls: domain 1 of 1, from 294 to 395: score 171.8, E = 1.6e-48 *->CLgIrrfAdaygceeLaeaAdrfilqnFleVakseEFlqLskeqLie CLgIr+f+da+gc+eL+++A+++++++F eV+k++EFl L+++++ + KIAA1687 294 CLGIRSFGDAQGCTELLNVAHKYTMEHFIEVIKNQEFLLLPANEISK 340 lLssDeLnVpsEeeVfeAvmrWvkhdvenRkkhlpeLLshVRLpLLspky lL sD++nVp+Ee++f+A+m+Wv hdv+nR+ l LLs++RLpLL+p+ KIAA1687 341 LLCSDDINVPDEETIFHALMQWVGHDVQNRQGELGMLLSYIRLPLLPPQL 390 Llevve<-* L + +e KIAA1687 391 LAD-LE 395 PF07707.5.fs: domain 1 of 1, from 294 to 395: score 169.8, E = 6.3e-48 *->CLgIrrfAdaygceeLaeaAdrfilqnFleVakseEFlqLskeqLie CLgIr+f+da+gc+eL+++A+++++++F eV+k++EFl L+++++ + KIAA1687 294 CLGIRSFGDAQGCTELLNVAHKYTMEHFIEVIKNQEFLLLPANEISK 340 lLssDeLnVpsEeeVfeAvmrWvkhdvenRkkhlpeLLshVRLpLLspky lL sD++nVp+Ee++f+A+m+Wv hdv+nR+ l LLs++RLpLL+p+ KIAA1687 341 LLCSDDINVPDEETIFHALMQWVGHDVQNRQGELGMLLSYIRLPLLPPQL 390 Llevve<-* L + +e KIAA1687 391 LAD-LE 395 PF01344.15.ls: domain 1 of 6, from 429 to 473: score 22.6, E = 0.0013 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< pR+ ++ g +Y++GG+d + ++e+YD++tn+W + +m+ KIAA1687 429 PRTKPRKSTV-GALYAVGGMDAmKGTTTIEKYDLRTNSWLHIGTMN 473 -* KIAA1687 - - PF01344.15.fs: domain 1 of 6, from 439 to 473: score 29.1, E = 2e-07 *->gkiYviGGydg.qslnsvevYDpetntWtklpsmp<-* g +Y++GG+d + ++e+YD++tn+W + +m+ KIAA1687 439 GALYAVGGMDAmKGTTTIEKYDLRTNSWLHIGTMN 473 PF01344.15.fs: domain 2 of 6, from 475 to 520: score 66.6, E = 4.3e-18 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +R +gv+v+d+k+Yv+GG+dg ln+ve+++p+ + Wt +p+m+ KIAA1687 475 RRLQFGVAVIDNKLYVVGGRDGlKTLNTVECFNPVGKIWTVMPPMS 520 -* KIAA1687 - - PF07646.5.ls: domain 1 of 5, from 475 to 520: score 32.9, E = 1e-06 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r + ++v+++klyvvGG+ +g ++++ +++p + W KIAA1687 475 RRLQFGVAVIDNKLYVVGGR--------DGLKTLNTVECFNPVGKIW 513 eklpalp<-* + +p++ KIAA1687 514 TVMPPMS 520 PF01344.15.ls: domain 2 of 6, from 475 to 520: score 68.6, E = 1.9e-17 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +R +gv+v+d+k+Yv+GG+dg ln+ve+++p+ + Wt +p+m+ KIAA1687 475 RRLQFGVAVIDNKLYVVGGRDGlKTLNTVECFNPVGKIWTVMPPMS 520 -* KIAA1687 - - PF07646.5.fs: domain 1 of 5, from 475 to 520: score 31.0, E = 1.4e-07 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r + ++v+++klyvvGG+ +g ++++ +++p + W KIAA1687 475 RRLQFGVAVIDNKLYVVGGR--------DGLKTLNTVECFNPVGKIW 513 eklpalp<-* + +p++ KIAA1687 514 TVMPPMS 520 PF01344.15.fs: domain 3 of 6, from 522 to 567: score 57.5, E = 1.6e-15 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +R+g gv++l+g +Y++GG+dg ++ln+ve++Dpe +W +++sm+ KIAA1687 522 HRHGLGVATLEGPMYAVGGHDGwSYLNTVERWDPEGRQWNYVASMS 567 -* KIAA1687 - - PF07646.5.ls: domain 2 of 5, from 522 to 567: score 22.8, E = 0.0011 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW r++ +++++g +y vGG+ +g ++++++ ++dpe ++W KIAA1687 522 HRHGLGVATLEGPMYAVGGH--------DGWSYLNTVERWDPEGRQW 560 eklpalp<-* +++++ KIAA1687 561 NYVASMS 567 PF07646.5.fs: domain 2 of 5, from 522 to 567: score 20.9, E = 7.8e-05 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW r++ +++++g +y vGG+ +g ++++++ ++dpe ++W KIAA1687 522 HRHGLGVATLEGPMYAVGGH--------DGWSYLNTVERWDPEGRQW 560 eklpalp<-* +++++ KIAA1687 561 NYVASMS 567 PF01344.15.ls: domain 3 of 6, from 522 to 567: score 59.5, E = 9.9e-15 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< +R+g gv++l+g +Y++GG+dg ++ln+ve++Dpe +W +++sm+ KIAA1687 522 HRHGLGVATLEGPMYAVGGHDGwSYLNTVERWDPEGRQWNYVASMS 567 -* KIAA1687 - - PF07646.5.ls: domain 3 of 5, from 569 to 614: score 30.1, E = 7.2e-06 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW pr+ + +v +++kly +GG+ +g++ + ++ ++dp tn+W KIAA1687 569 PRSTVGVVALNNKLYAIGGR--------DGSSCLKSMEYFDPHTNKW 607 eklpalp<-* + ++++ KIAA1687 608 SLCAPMS 614 PF01344.15.fs: domain 4 of 6, from 569 to 614: score 67.3, E = 2.7e-18 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< pRs +gvv+l++k+Y+iGG+dg+++l+s e++Dp tn+W+ +++m+ KIAA1687 569 PRSTVGVVALNNKLYAIGGRDGsSCLKSMEYFDPHTNKWSLCAPMS 614 -* KIAA1687 - - PF01344.15.ls: domain 4 of 6, from 569 to 614: score 69.3, E = 1.1e-17 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< pRs +gvv+l++k+Y+iGG+dg+++l+s e++Dp tn+W+ +++m+ KIAA1687 569 PRSTVGVVALNNKLYAIGGRDGsSCLKSMEYFDPHTNKWSLCAPMS 614 -* KIAA1687 - - PF07646.5.fs: domain 3 of 5, from 569 to 614: score 28.2, E = 8.1e-07 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW pr+ + +v +++kly +GG+ +g++ + ++ ++dp tn+W KIAA1687 569 PRSTVGVVALNNKLYAIGGR--------DGSSCLKSMEYFDPHTNKW 607 eklpalp<-* + ++++ KIAA1687 608 SLCAPMS 614 PF01344.15.fs: domain 5 of 6, from 616 to 667: score 55.7, E = 5.5e-15 *->pRsgagvvvldgkiYviGGydg.......qslnsvevYDpetntWtk +R g+gv++++g +Yv+GG+d + +++ ++ +++ve+YDp+ ++W+ KIAA1687 616 RRGGVGVATYNGFLYVVGGHDApasnhcsRLSDCVERYDPKGDSWST 662 lpsmp<-* +++++ KIAA1687 663 VAPLS 667 PF07646.5.fs: domain 4 of 5, from 616 to 667: score 22.1, E = 3.7e-05 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r+++ +++++g lyvvGG+ +++ +++ +s+ + ++dp+ +W KIAA1687 616 RRGGVGVATYNGFLYVVGGH--DAPASNHCSRLSDCVERYDPKGDSW 660 eklpalp<-* + +++l KIAA1687 661 STVAPLS 667 PF01344.15.ls: domain 5 of 6, from 616 to 667: score 57.7, E = 3.6e-14 *->pRsgagvvvldgkiYviGGydg.......qslnsvevYDpetntWtk +R g+gv++++g +Yv+GG+d + +++ ++ +++ve+YDp+ ++W+ KIAA1687 616 RRGGVGVATYNGFLYVVGGHDApasnhcsRLSDCVERYDPKGDSWST 662 lpsmp<-* +++++ KIAA1687 663 VAPLS 667 PF07646.5.ls: domain 4 of 5, from 616 to 667: score 24.1, E = 0.00046 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW +r+++ +++++g lyvvGG+ +++ +++ +s+ + ++dp+ +W KIAA1687 616 RRGGVGVATYNGFLYVVGGH--DAPASNHCSRLSDCVERYDPKGDSW 660 eklpalp<-* + +++l KIAA1687 661 STVAPLS 667 PF07646.5.fs: domain 5 of 5, from 669 to 714: score 28.8, E = 5.6e-07 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW pr +a++ +g+klyvvGG+ +g +++++ +d + n+W KIAA1687 669 PRDAVAVCPLGDKLYVVGGY--------DGHTYLNTVESYDAQRNEW 707 eklpalp<-* ++ ++ KIAA1687 708 KEEVPVN 714 PF01344.15.fs: domain 6 of 6, from 669 to 714: score 54.6, E = 1.1e-14 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< pR ++v+ l++k+Yv+GGydg+++ln+ve+YD n+W++ + + KIAA1687 669 PRDAVAVCPLGDKLYVVGGYDGhTYLNTVESYDAQRNEWKEEVPVN 714 -* KIAA1687 - - PF01344.15.ls: domain 6 of 6, from 669 to 714: score 56.6, E = 7.5e-14 *->pRsgagvvvldgkiYviGGydg.qslnsvevYDpetntWtklpsmp< pR ++v+ l++k+Yv+GGydg+++ln+ve+YD n+W++ + + KIAA1687 669 PRDAVAVCPLGDKLYVVGGYDGhTYLNTVESYDAQRNEWKEEVPVN 714 -* KIAA1687 - - PF07646.5.ls: domain 5 of 5, from 669 to 714: score 30.7, E = 4.8e-06 *->pryphasvvpggklyvvGGsfkgnrgtgngdesssdllvldpetnvW pr +a++ +g+klyvvGG+ +g +++++ +d + n+W KIAA1687 669 PRDAVAVCPLGDKLYVVGGY--------DGHTYLNTVESYDAQRNEW 707 eklpalp<-* ++ ++ KIAA1687 708 KEEVPVN 714 //