hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09554106/chunk_1/iprscan-20080502-09554106.nocrc
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Query sequence: KIAA1689
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00249.21.fs   Myb-like DNA-binding domain              22.9    2.4e-05   1
PF00249.21.ls   Myb-like DNA-binding domain              24.6    0.00032   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00249.21.fs     1/1     303   348 ..     1    65 []    22.9  2.4e-05
PF00249.21.ls     1/1     303   348 ..     1    65 []    24.6  0.00032

Alignments of top-scoring domains:
PF00249.21.fs: domain 1 of 1, from 303 to 348: score 22.9, E = 2.4e-05
                   *->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
                      +++W+  E++ ++ a+++ G++           ++ I+++++     
    KIAA1689   303    SKPWSNKETDMFFLAISMVGTD-----------FSMIGQLFP----- 333  

                   nvlgrtaeqcklryykyk<-*
                       r + ++k+++++ +   
    KIAA1689   334 ---HRARIEIKNKFKREE    348  

PF00249.21.ls: domain 1 of 1, from 303 to 348: score 24.6, E = 0.00032
                   *->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
                      +++W+  E++ ++ a+++ G++           ++ I+++++     
    KIAA1689   303    SKPWSNKETDMFFLAISMVGTD-----------FSMIGQLFP----- 333  

                   nvlgrtaeqcklryykyk<-*
                       r + ++k+++++ +   
    KIAA1689   334 ---HRARIEIKNKFKREE    348  

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