hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10011475/chunk_1/iprscan-20080502-10011475.nocrc
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Query sequence: KIAA1692
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00169.19.fs PH domain                                       63.0      1e-18   1
PF00169.19.ls PH domain                                       65.0    2.3e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00169.19.fs   1/1     739   841 ..     1    92 []    63.0    1e-18
PF00169.19.ls   1/1     739   841 ..     1    92 []    65.0  2.3e-16

Alignments of top-scoring domains:
PF00169.19.fs: domain 1 of 1, from 739 to 841: score 63.0, E = 1e-18
                   *->vikeGwLlkkg....gkkswkkRyfvLfddvLlyykdkk..kkpkgs
                      + +eG L+ k  + +++k+wk Ryf+L +++Ll+ k k++++     
    KIAA1692   739    PLIEGKLKEKQvrwkFIKRWKTRYFTLAGNQLLFQKGKSkdDPDDCP 785  

                   ipLsgiqvtkvpdn.....krkncFeirt.dretlllqaeseeerkeWvk
                   i Ls++q +k+++ +++++  + +Fei t+++ t++++a++e+ ++eW++
    KIAA1692   786 IELSKVQSVKAVAKkrrdrSLPRAFEIFTdNK-TYVFKAKDEKNAEEWLQ 834  

                   aiqsair<-*
                   +i+ a++   
    KIAA1692   835 CINVAVA    841  

PF00169.19.ls: domain 1 of 1, from 739 to 841: score 65.0, E = 2.3e-16
                   *->vikeGwLlkkg....gkkswkkRyfvLfddvLlyykdkk..kkpkgs
                      + +eG L+ k  + +++k+wk Ryf+L +++Ll+ k k++++     
    KIAA1692   739    PLIEGKLKEKQvrwkFIKRWKTRYFTLAGNQLLFQKGKSkdDPDDCP 785  

                   ipLsgiqvtkvpdn.....krkncFeirt.dretlllqaeseeerkeWvk
                   i Ls++q +k+++ +++++  + +Fei t+++ t++++a++e+ ++eW++
    KIAA1692   786 IELSKVQSVKAVAKkrrdrSLPRAFEIFTdNK-TYVFKAKDEKNAEEWLQ 834  

                   aiqsair<-*
                   +i+ a++   
    KIAA1692   835 CINVAVA    841  

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