hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10011475/chunk_1/iprscan-20080502-10011475.nocrc
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Query sequence: KIAA1692
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  66.1    4.4e-15   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1     739   843 ..     1    82 []    66.1  4.4e-15

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 739 to 843: score 66.1, E = 4.4e-15
                   *->vikeGwLlkks.....k.swkkryfvLfngvLlyyksk....kpkgs
                      +++eG L+ k  + +  ++wk ryf+L +++Ll+ k k++++    +
    KIAA1692   739    PLIEGKLKEKQvrwkfIkRWKTRYFTLAGNQLLFQKGKskddPDDCP 785  

                   ipLsgc.svre.p..........cFeivt.drtlllqAeseeereeWvea
                   i Ls+++sv+  ++++++++ +++Fei+t+++t++++A++e+ +eeW+++
    KIAA1692   786 IELSKVqSVKAvAkkrrdrslprAFEIFTdNKTYVFKAKDEKNAEEWLQC 835  

                   lqsaiaka<-*
                   ++ a+a+a   
    KIAA1692   836 INVAVAQA    843  

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