HUGE

Gene/Protein Characteristic Table for KIAA1704

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK00891
Accession No. :	AB051491
Description :
HUGO Gene Name :
Clone Name :	fj16938 [Vector Info]
Flexi ORF Clone :	pF1KSDA1704
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 4030 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 2972 bp

Genome contig ID gi51511729f_44361755
PolyA signal sequence
(AATAAA,-22)
+----*----+----*----+----*----+----
TTTTTTATGTATAAATAAAGTTTTATCTATATCTG
Flanking genome sequence
(143989 - 144038)
----+----*----+----*----+----*----+----*----+----*
AGAAGTTGTAGTATTTATTTTTGTTTTAACATTATTAGCTTTTCTGAAGC

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 13 f 44461755 44505742 12 99.2 Perfect prediction

Features of the protein sequence	Description

Length: 351 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAE89642	1.3e-108	97.7	unnamed protein...	Macaca fascicularis
XP_001094145	2.6e-108	97.1	similar to F26A...	Macaca mulatta
BAE88065	8.6e-108	96.8	unnamed protein...	Macaca fascicularis
XP_851499	8.6e-102	91.9	similar to CG33...	Canis lupus fam...
XP_001363803	2.1e-89	81.7	similar to pol ...	Monodelphis dom...

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: TTGCTTCCAGGAGTTACTACC

Primer_r
: TCCGTCCTGTGCAATAACTAC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 17

Experimental conditions

Panel name	: unigene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	2972 bp
Genome contig ID	gi51511729f_44361755
PolyA signal sequence (AATAAA,-22)	+--------+--------+----*----+---- TTTTTTATGTATAAATAAAGTTTTATCTATATCTG
Flanking genome sequence (143989 - 144038)	----+--------+--------+--------+--------+----* AGAAGTTGTAGTATTTATTTTTGTTTTAACATTATTAGCTTTTCTGAAGC

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	13	f	44461755	44505742	12	99.2	Perfect prediction

Primer_f	: TTGCTTCCAGGAGTTACTACC
Primer_r	: TCCGTCCTGTGCAATAACTAC
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA1704

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information