hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10231438/chunk_1/iprscan-20080502-10231438.nocrc
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Query sequence: KIAA1705
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02862.8.ls DDHD domain                                    398.8   7.6e-117   1
PF02862.8.fs DDHD domain                                    396.8   2.9e-116   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02862.8.fs   1/1     237   484 ..     1   276 []   396.8 2.9e-116
PF02862.8.ls   1/1     237   484 ..     1   276 []   398.8 7.6e-117

Alignments of top-scoring domains:
PF02862.8.fs: domain 1 of 1, from 237 to 484: score 396.8, E = 2.9e-116
                   *->LdFkvenfFaiGSPlGlfltlRglkiGDRPEFPngdslDllvsrpaC
                      L+FkvenfF++GSPl++fl+lRg+++G      n++s+D++++r++C
    KIAA1705   237    LKFKVENFFCMGSPLAVFLALRGIRPG------NTGSQDHILPREIC 277  

                   kqfYNIFHPlDPvAYRLEPLvvpefsKhikPvkIphykgrkrLglelsep
                   ++++NIFHP+DPvAYRLEPL+ +++s +i+Pv+I++y+++++L++e ++p
    KIAA1705   278 NRLLNIFHPTDPVAYRLEPLILKHYS-NISPVQIHWYNTSNPLPYEHMKP 326  

                   ltrviadlpqnflsnlqssiksspvltsasgasrkneeeteevkestars
                   ++  +a+ p+++++n+++s+++spv+++++++++++e++t+++k+s+++ 
    KIAA1705   327 SFLNPAKEPTSVSENEGISTIPSPVTSPVLSRRHYGESITNIGKASILG- 375  

                   GCSPRmTpapeqtenltemliareeravesqpssfgrsSiektkStaslg
                           a++++++l++ml++r++r++ +q s+++++S+e++k      
    KIAA1705   376 --------AASIGKGLGGMLFSRFGRSSTTQSSETSKDSMEDEK------ 411  

                   svnktvaenietapeaskeedlaikvlmskLngtkRIDYvLqePaallaf
                      k+va++  t++ +++++++++++l+s+L+ ++RID++L+e   +l++
    KIAA1705   412 ---KPVASPSATTVGTQTLPHSSSGFLDSALELDHRIDFELRE---GLVE 455  

                   nsYlsalksHasYWeSeDvAlFlLkeiyr<-*
                   ++Y+sa++sH++YW+S+DvAlFlL+++y+   
    KIAA1705   456 SRYWSAVTSHTAYWSSLDVALFLLTFMYK    484  

PF02862.8.ls: domain 1 of 1, from 237 to 484: score 398.8, E = 7.6e-117
                   *->LdFkvenfFaiGSPlGlfltlRglkiGDRPEFPngdslDllvsrpaC
                      L+FkvenfF++GSPl++fl+lRg+++G      n++s+D++++r++C
    KIAA1705   237    LKFKVENFFCMGSPLAVFLALRGIRPG------NTGSQDHILPREIC 277  

                   kqfYNIFHPlDPvAYRLEPLvvpefsKhikPvkIphykgrkrLglelsep
                   ++++NIFHP+DPvAYRLEPL+ +++s +i+Pv+I++y+++++L++e ++p
    KIAA1705   278 NRLLNIFHPTDPVAYRLEPLILKHYS-NISPVQIHWYNTSNPLPYEHMKP 326  

                   ltrviadlpqnflsnlqssiksspvltsasgasrkneeeteevkestars
                   ++  +a+ p+++++n+++s+++spv+++++++++++e++t+++k+s+++ 
    KIAA1705   327 SFLNPAKEPTSVSENEGISTIPSPVTSPVLSRRHYGESITNIGKASILG- 375  

                   GCSPRmTpapeqtenltemliareeravesqpssfgrsSiektkStaslg
                           a++++++l++ml++r++r++ +q s+++++S+e++k      
    KIAA1705   376 --------AASIGKGLGGMLFSRFGRSSTTQSSETSKDSMEDEK------ 411  

                   svnktvaenietapeaskeedlaikvlmskLngtkRIDYvLqePaallaf
                      k+va++  t++ +++++++++++l+s+L+ ++RID++L+e   +l++
    KIAA1705   412 ---KPVASPSATTVGTQTLPHSSSGFLDSALELDHRIDFELRE---GLVE 455  

                   nsYlsalksHasYWeSeDvAlFlLkeiyr<-*
                   ++Y+sa++sH++YW+S+DvAlFlL+++y+   
    KIAA1705   456 SRYWSAVTSHTAYWSSLDVALFLLTFMYK    484  

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