hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10501826/chunk_1/iprscan-20080502-10501826.nocrc
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Query sequence: KIAA1720
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05276.4.ls SH3 domain-binding protein 5 (SH3BP5)          321.6    1.3e-93   1
PF05276.4.fs SH3 domain-binding protein 5 (SH3BP5)          319.6    5.3e-93   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05276.4.fs   1/1      80   316 ..     1   243 []   319.6  5.3e-93
PF05276.4.ls   1/1      80   316 ..     1   243 []   321.6  1.3e-93

Alignments of top-scoring domains:
PF05276.4.fs: domain 1 of 1, from 80 to 316: score 319.6, E = 5.3e-93
                   *->EedeldpsIqkELEkLNnaTDdINklEveLElArkkFRetlveftkk
                      Ee+eldp+Iq+ELE LN+a  +IN  E +L+ Ar + R +l e+ +k
    KIAA1720    80    EEEELDPRIQEELEHLNQASEEINQVELQLDEARTTYRRILQESARK 126  

                   LkelsKKlgkaIeKaRPfyElkskeReareEvQKAAekFeRAteileaAK
                   L      lg++IeKaRP+yE+++ + ea+ E QKAA + eRA + + aA+
    KIAA1720   127 LNTQGSHLGSCIEKARPYYEARRLAKEAQQETQKAALRYERAVSMHNAAR 176  

                   EqVsLaeqsFLsnnqelqfekawqEvLNHatQrVmEAEeektkaEklHas
                   E V  aeq  +     l++   wqE+LNHat +V EAEee+++ E +H++
    KIAA1720   177 EMVFVAEQGVMADKNRLDPT--WQEMLNHATCKVNEAEEERLRGEREHQR 224  

                   kakallaleeklRqlEkenrrAIkKSRPYFEkKevltkqLeaQKetiseL
                    +++  ++e + ++l k +rrAI KSRPYFE+K+ + ++Le  K+ + eL
    KIAA1720   225 VTRLCQQAEARVQALQKTLRRAIGKSRPYFELKAQFSQILEEHKAKVTEL 274  

                   eaeVaeaKdeYstsLRnLERISdeIHeeRssqsslapeSgprsdgv<-*
                   e++Va+aK  Ys +LRnLE+IS++IH +R+    l+p   p ++     
    KIAA1720   275 EQQVAQAKTRYSVALRNLEQISEQIHARRRG--GLPP--HPLGPRR    316  

PF05276.4.ls: domain 1 of 1, from 80 to 316: score 321.6, E = 1.3e-93
                   *->EedeldpsIqkELEkLNnaTDdINklEveLElArkkFRetlveftkk
                      Ee+eldp+Iq+ELE LN+a  +IN  E +L+ Ar + R +l e+ +k
    KIAA1720    80    EEEELDPRIQEELEHLNQASEEINQVELQLDEARTTYRRILQESARK 126  

                   LkelsKKlgkaIeKaRPfyElkskeReareEvQKAAekFeRAteileaAK
                   L      lg++IeKaRP+yE+++ + ea+ E QKAA + eRA + + aA+
    KIAA1720   127 LNTQGSHLGSCIEKARPYYEARRLAKEAQQETQKAALRYERAVSMHNAAR 176  

                   EqVsLaeqsFLsnnqelqfekawqEvLNHatQrVmEAEeektkaEklHas
                   E V  aeq  +     l++   wqE+LNHat +V EAEee+++ E +H++
    KIAA1720   177 EMVFVAEQGVMADKNRLDPT--WQEMLNHATCKVNEAEEERLRGEREHQR 224  

                   kakallaleeklRqlEkenrrAIkKSRPYFEkKevltkqLeaQKetiseL
                    +++  ++e + ++l k +rrAI KSRPYFE+K+ + ++Le  K+ + eL
    KIAA1720   225 VTRLCQQAEARVQALQKTLRRAIGKSRPYFELKAQFSQILEEHKAKVTEL 274  

                   eaeVaeaKdeYstsLRnLERISdeIHeeRssqsslapeSgprsdgv<-*
                   e++Va+aK  Ys +LRnLE+IS++IH +R+    l+p   p ++     
    KIAA1720   275 EQQVAQAKTRYSVALRNLEQISEQIHARRRG--GLPP--HPLGPRR    316  

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