hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10572372/chunk_1/iprscan-20080502-10572372.nocrc
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Query sequence: KIAA1724
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF01066.11.fs   CDP-alcohol phosphatidyltransferase      43.7    7.3e-12   1
PF01066.11.ls   CDP-alcohol phosphatidyltransferase      34.2    4.2e-07   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF01066.11.fs     1/1     108   199 ..     1    96 [.    43.7  7.3e-12
PF01066.11.ls     1/1     108   252 ..     1   165 []    34.2  4.2e-07

Alignments of top-scoring domains:
PF01066.11.fs: domain 1 of 1, from 108 to 199: score 43.7, E = 7.3e-12
                   *->lllfllaallDalDGylARklgnqvSrfGafLDplaDkisdglalva
                      ++l ++a  lD++DG++AR++ n ++++G+++D+ +D++s++  +v+
    KIAA1724   108    GILNFVAYTLDGVDGKQARRT-NSSTPLGELFDHGLDSWSCVYFVVT 153  

                   layaypvslpgwltldllllilarfillsalrlaranvgvvglaaflgg<
                   ++     ++ g + +++++l+l++ ++l ++ l++++++++g  ++ +g 
    KIAA1724   154 VYSI---FGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYNTGILFLPWG  199  

                   -*
                     
    KIAA1724     -    -    

PF01066.11.ls: domain 1 of 1, from 108 to 252: score 34.2, E = 4.2e-07
                   *->lllfllaallDalDGylARklgnqvSrfGafLDplaDkisdglalva
                      ++l ++a  lD++DG++AR++ n ++++G+++D+ +D++s++  +v+
    KIAA1724   108    GILNFVAYTLDGVDGKQARRT-NSSTPLGELFDHGLDSWSCVYFVVT 153  

                   layaypvslpgwltldllllilarfillsalrlaranvgvvgl.aaflgg
                   ++     ++ g + +++++l+l++ ++l ++ l++++++++g     +g 
    KIAA1724   154 VYSI---FGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYNTGIlFLPWGY 200  

                   kiktgeqflailllllfgigppnsklsylilenwllalglvilallfilq
                    i   +++  + +++++           +++e+w++ ++  +l+  +++ 
    KIAA1724   201 DISQ-VTISFVYIVTAV-----------VGVEAWYEPFLFNFLYRDLFT- 237  

                   mgviaailtlisvveylla<-*
                       a i+ +  +v++ +    
    KIAA1724   238 ----AMIIGCALCVTLPMS    252  

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