# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/pj00464.fasta.nr -Q ../query/KIAA1739.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1739, 963 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7822825 sequences Expectation_n fit: rho(ln(x))= 5.3582+/-0.000189; mu= 14.1598+/- 0.011 mean_var=91.5114+/-17.645, 0's: 39 Z-trim: 50 B-trim: 0 in 0/65 Lambda= 0.134072 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119591731|gb|EAW71325.1| sema domain, immunoglo ( 886) 6172 1204.6 0 gi|47606208|sp|Q9C0C4.2|SEM4C_HUMAN RecName: Full= ( 833) 5511 1076.7 0 gi|37182802|gb|AAQ89201.1| SEMA4C [Homo sapiens] ( 833) 5508 1076.1 0 gi|109103896|ref|XP_001100467.1| PREDICTED: semaph ( 833) 5380 1051.4 0 gi|114579013|ref|XP_515634.2| PREDICTED: semaphori ( 858) 5209 1018.3 0 gi|194671303|ref|XP_604387.4| PREDICTED: similar t ( 833) 5182 1013.1 0 gi|73970098|ref|XP_538464.2| PREDICTED: similar to ( 849) 5174 1011.5 0 gi|8134699|sp|Q64151.1|SEM4C_MOUSE RecName: Full=S ( 834) 4874 953.5 0 gi|148682548|gb|EDL14495.1| mCG17761, isoform CRA_ ( 914) 4874 953.5 0 gi|149046375|gb|EDL99268.1| sema domain, immunoglo ( 834) 4857 950.2 0 gi|126303453|ref|XP_001379915.1| PREDICTED: simila ( 832) 4774 934.1 0 gi|32425767|gb|AAH17476.2| SEMA4C protein [Homo sa ( 645) 4482 877.6 0 gi|119591732|gb|EAW71326.1| sema domain, immunoglo ( 794) 4318 845.9 0 gi|38649055|gb|AAH62984.1| SEMA4C protein [Homo sa ( 543) 3766 739.0 1.4e-210 gi|62822419|gb|AAY14967.1| unknown [Homo sapiens] ( 510) 3526 692.6 1.3e-196 gi|7020424|dbj|BAA91124.1| unnamed protein product ( 510) 3517 690.8 4.3e-196 gi|50415520|gb|AAH78116.1| Unknown (protein for MG ( 834) 3353 659.3 2.1e-186 gi|194220400|ref|XP_001916376.1| PREDICTED: sema d ( 647) 2889 569.4 1.9e-159 gi|122891339|emb|CAM14131.1| novel protein similar ( 811) 2581 510.0 1.9e-141 gi|134054524|emb|CAM73256.1| unnamed protein produ ( 863) 2554 504.8 7.3e-140 gi|149585882|ref|XP_001520007.1| PREDICTED: simila ( 465) 2307 456.7 1.1e-125 gi|22761444|dbj|BAC11588.1| unnamed protein produc ( 333) 2302 455.6 1.7e-125 gi|33341678|gb|AAQ15210.1|AF370374_1 FP2823 [Homo ( 374) 1901 378.1 4.2e-102 gi|47123219|gb|AAH70859.1| MGC84614 protein [Xenop ( 830) 1900 378.2 8.6e-102 gi|73998651|ref|XP_543973.2| PREDICTED: similar to ( 840) 1875 373.4 2.5e-100 gi|13633937|sp|Q9NTN9.1|SEM4G_HUMAN RecName: Full= ( 838) 1868 372.1 6.3e-100 gi|109090287|ref|XP_001109068.1| PREDICTED: semaph ( 839) 1862 370.9 1.4e-99 gi|149040257|gb|EDL94295.1| sema domain, immunoglo ( 837) 1846 367.8 1.2e-98 gi|8134702|sp|Q9WUH7.1|SEM4G_MOUSE RecName: Full=S ( 837) 1828 364.3 1.3e-97 gi|126273501|ref|XP_001379491.1| PREDICTED: simila ( 840) 1819 362.6 4.5e-97 gi|109090285|ref|XP_001109124.1| PREDICTED: sema d ( 844) 1795 357.9 1.1e-95 gi|151554276|gb|AAI48104.1| SEMA4G protein [Bos ta ( 844) 1792 357.4 1.7e-95 gi|56462541|emb|CAI10916.1| sema domain, immunoglo ( 843) 1786 356.2 3.8e-95 gi|194205755|ref|XP_001916730.1| PREDICTED: sema d ( 844) 1776 354.3 1.4e-94 gi|47220634|emb|CAG06556.1| unnamed protein produc ( 836) 1772 353.5 2.5e-94 gi|148709996|gb|EDL41942.1| sema domain, immunoglo ( 776) 1747 348.6 6.6e-93 gi|189526148|ref|XP_693092.3| PREDICTED: similar t ( 879) 1743 347.9 1.2e-92 gi|194224945|ref|XP_001493931.2| PREDICTED: simila ( 937) 1717 342.9 4.2e-91 gi|109112122|ref|XP_001090890.1| PREDICTED: semaph ( 862) 1691 337.8 1.3e-89 gi|37927181|pdb|1OLZ|A Chain A, The Ligand-Binding ( 663) 1689 337.3 1.4e-89 gi|32493365|gb|AAH54500.1| Sema domain, immunoglob ( 862) 1690 337.6 1.5e-89 gi|168270916|dbj|BAG10251.1| semaphorin-4D precurs ( 862) 1689 337.4 1.7e-89 gi|8134701|sp|Q92854.1|SEM4D_HUMAN RecName: Full=S ( 862) 1689 337.4 1.7e-89 gi|68533115|dbj|BAE06112.1| SEMA4D variant protein ( 870) 1689 337.4 1.7e-89 gi|73947068|ref|XP_533551.2| PREDICTED: similar to ( 923) 1688 337.3 2e-89 gi|119583171|gb|EAW62767.1| hCG1985052, isoform CR ( 853) 1684 336.5 3.3e-89 gi|114625455|ref|XP_001141771.1| PREDICTED: semaph ( 928) 1684 336.5 3.5e-89 gi|74210023|dbj|BAE21302.1| unnamed protein produc ( 814) 1681 335.9 4.8e-89 gi|49248072|gb|AAH49780.2| Sema domain, immunoglob ( 861) 1681 335.9 5e-89 gi|194041392|ref|XP_001928494.1| PREDICTED: simila ( 865) 1678 335.3 7.5e-89 >>gi|119591731|gb|EAW71325.1| sema domain, immunoglobuli (886 aa) initn: 6172 init1: 6172 opt: 6172 Z-score: 6449.1 bits: 1204.6 E(): 0 Smith-Waterman score: 6172; 100.000% identity (100.000% similar) in 886 aa overlap (78-963:1-886) 50 60 70 80 90 100 KIAA17 AAAEEAKVGWGCPALRPEVPLTLRARAISLMASSGRKLWLRYPSFLPAAWICLLPGWERL :::::::::::::::::::::::::::::: gi|119 MASSGRKLWLRYPSFLPAAWICLLPGWERL 10 20 30 110 120 130 140 150 160 KIAA17 GRPRWGCQGQRLFQKCPLLPIRGFGWHLLVAWGAGSRGARLRAVEPQGSCPSAAMLTPAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GRPRWGCQGQRLFQKCPLLPIRGFGWHLLVAWGAGSRGARLRAVEPQGSCPSAAMLTPAE 40 50 60 70 80 90 170 180 190 200 210 220 KIAA17 LATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKT 100 110 120 130 140 150 230 240 250 260 270 280 KIAA17 ECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKG 160 170 180 190 200 210 290 300 310 320 330 340 KIAA17 KCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVG 220 230 240 250 260 270 350 360 370 380 390 400 KIAA17 SAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTT 280 290 300 310 320 330 410 420 430 440 450 460 KIAA17 FLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEI 340 350 360 370 380 390 470 480 490 500 510 520 KIAA17 QRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKH 400 410 420 430 440 450 530 540 550 560 570 580 KIAA17 PLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPW 460 470 480 490 500 510 590 600 610 620 630 640 KIAA17 VHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYC 520 530 540 550 560 570 650 660 670 680 690 700 KIAA17 AWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPC 580 590 600 610 620 630 710 720 730 740 750 760 KIAA17 HLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLA 640 650 660 670 680 690 770 780 790 800 810 820 KIAA17 AEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKG 700 710 720 730 740 750 830 840 850 860 870 880 KIAA17 AKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGG 760 770 780 790 800 810 890 900 910 920 930 940 KIAA17 PPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKL 820 830 840 850 860 870 950 960 KIAA17 QQRQPLPDSNPEESSV :::::::::::::::: gi|119 QQRQPLPDSNPEESSV 880 >>gi|47606208|sp|Q9C0C4.2|SEM4C_HUMAN RecName: Full=Sema (833 aa) initn: 5506 init1: 5506 opt: 5511 Z-score: 5758.5 bits: 1076.7 E(): 0 Smith-Waterman score: 5511; 96.759% identity (97.479% similar) in 833 aa overlap (133-963:8-833) 110 120 130 140 150 160 KIAA17 GWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA--WGAGSRGARLRAVEPQGSCPSA : ::.: :: : . . :. . :. gi|476 MAPHWAVW-LLAARLWGLGIGAEVWWNLVPRKTVSSG 10 20 30 170 180 190 200 210 220 KIAA17 AMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 ------ELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE 40 50 60 70 80 90 230 240 250 260 270 280 KIAA17 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG 100 110 120 130 140 150 290 300 310 320 330 340 KIAA17 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL 160 170 180 190 200 210 350 360 370 380 390 400 KIAA17 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART 220 230 240 250 260 270 410 420 430 440 450 460 KIAA17 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 280 290 300 310 320 330 470 480 490 500 510 520 KIAA17 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI 340 350 360 370 380 390 530 540 550 560 570 580 KIAA17 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK 400 410 420 430 440 450 590 600 610 620 630 640 KIAA17 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV 460 470 480 490 500 510 650 660 670 680 690 700 KIAA17 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG 520 530 540 550 560 570 710 720 730 740 750 760 KIAA17 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE 580 590 600 610 620 630 770 780 790 800 810 820 KIAA17 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL 640 650 660 670 680 690 830 840 850 860 870 880 KIAA17 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA 700 710 720 730 740 750 890 900 910 920 930 940 KIAA17 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA 760 770 780 790 800 810 950 960 KIAA17 DELRRKLQQRQPLPDSNPEESSV ::::::::::::::::::::::: gi|476 DELRRKLQQRQPLPDSNPEESSV 820 830 >>gi|37182802|gb|AAQ89201.1| SEMA4C [Homo sapiens] (833 aa) initn: 5503 init1: 5503 opt: 5508 Z-score: 5755.3 bits: 1076.1 E(): 0 Smith-Waterman score: 5508; 96.639% identity (97.479% similar) in 833 aa overlap (133-963:8-833) 110 120 130 140 150 160 KIAA17 GWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA--WGAGSRGARLRAVEPQGSCPSA : ::.: :: : . . :. . :. gi|371 MAPHWAVW-LLAARLWGLGIGAEVWWNLVPRKTVSSG 10 20 30 170 180 190 200 210 220 KIAA17 AMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 ------ELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE 40 50 60 70 80 90 230 240 250 260 270 280 KIAA17 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG 100 110 120 130 140 150 290 300 310 320 330 340 KIAA17 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL 160 170 180 190 200 210 350 360 370 380 390 400 KIAA17 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART 220 230 240 250 260 270 410 420 430 440 450 460 KIAA17 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 280 290 300 310 320 330 470 480 490 500 510 520 KIAA17 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI 340 350 360 370 380 390 530 540 550 560 570 580 KIAA17 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK 400 410 420 430 440 450 590 600 610 620 630 640 KIAA17 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV 460 470 480 490 500 510 650 660 670 680 690 700 KIAA17 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG 520 530 540 550 560 570 710 720 730 740 750 760 KIAA17 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|371 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGTFLYDARLQALVVMAAQPRHAGAYHCFSE 580 590 600 610 620 630 770 780 790 800 810 820 KIAA17 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL 640 650 660 670 680 690 830 840 850 860 870 880 KIAA17 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA 700 710 720 730 740 750 890 900 910 920 930 940 KIAA17 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA 760 770 780 790 800 810 950 960 KIAA17 DELRRKLQQRQPLPDSNPEESSV ::::::::::::::::::::::: gi|371 DELRRKLQQRQPLPDSNPEESSV 820 830 >>gi|109103896|ref|XP_001100467.1| PREDICTED: semaphorin (833 aa) initn: 5373 init1: 5373 opt: 5380 Z-score: 5621.5 bits: 1051.4 E(): 0 Smith-Waterman score: 5380; 94.118% identity (96.759% similar) in 833 aa overlap (133-963:8-833) 110 120 130 140 150 160 KIAA17 GWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA--WGAGSRGARLRAVEPQGSCPSA : ::.: :: : . . :. . :. gi|109 MAPHWAVW-LLAARLWGLGIGAEVWWNLVPRKTVASG 10 20 30 170 180 190 200 210 220 KIAA17 AMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE :::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|109 ------ELATVVRRFSQTGIQDFLTLTLTEQTGLLYVGAREALFAFSMEALELQGAISWE 40 50 60 70 80 90 230 240 250 260 270 280 KIAA17 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG ::.:::::::::::::::::::::::::::::::::.::::::::::::.::::::::.: gi|109 APAEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYACGTYAFQPKCTYINMLTFTLERG 100 110 120 130 140 150 290 300 310 320 330 340 KIAA17 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 EFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL 160 170 180 190 200 210 350 360 370 380 390 400 KIAA17 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 NEPHFVGSAYVPESVGSLTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART 220 230 240 250 260 270 410 420 430 440 450 460 KIAA17 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC ::.:::::::::::::::.::::::::::.:::::::::::::::::::.::::::::.: gi|109 LQKKWTTFLKARLACSAPDWQLYFNQLQAVHTLQDTSWHNTTFFGVFQARWGDMYLSAVC 280 290 300 310 320 330 470 480 490 500 510 520 KIAA17 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI ::::::::::::::::::.:.:::: ::::::::::::::::::::::::::::::::: gi|109 EYQLEEIQRVFEGPYKEYREQAQKWGRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNT 340 350 360 370 380 390 530 540 550 560 570 580 KIAA17 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LNFIKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK 400 410 420 430 440 450 590 600 610 620 630 640 KIAA17 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV :::::::::::::::::::::: ::::.::::::::::::::::::.::::::::::::: gi|109 AVSLGPWVHLIEELQLFDQEPMGSLVLAQSKKLLFAGSRSQLVQLPLADCMKYRSCADCV 460 470 480 490 500 510 650 660 670 680 690 700 KIAA17 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG :::::::::::::::::::::::::::::::: :::::::::::::::: :::::::::: gi|109 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMISDTSGICNLRGSKKVRATPKNITVVAG 520 530 540 550 560 570 710 720 730 740 750 760 KIAA17 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE 580 590 600 610 620 630 770 780 790 800 810 820 KIAA17 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL 640 650 660 670 680 690 830 840 850 860 870 880 KIAA17 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA 700 710 720 730 740 750 890 900 910 920 930 940 KIAA17 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA 760 770 780 790 800 810 950 960 KIAA17 DELRRKLQQRQPLPDSNPEESSV ::::::::::::::::::::::: gi|109 DELRRKLQQRQPLPDSNPEESSV 820 830 >>gi|114579013|ref|XP_515634.2| PREDICTED: semaphorin 4C (858 aa) initn: 5208 init1: 5208 opt: 5209 Z-score: 5442.6 bits: 1018.3 E(): 0 Smith-Waterman score: 5376; 84.216% identity (84.528% similar) in 963 aa overlap (1-963:45-858) 10 20 30 KIAA17 LCSHLWQPGLGSCWSEGFPEAGSTHSRLCL :::::::::::::::::::::::::::::: gi|114 WGLGIGAEVWWNLVPRKTVSSGGECLEGGLLCSHLWQPGLGSCWSEGFPEAGSTHSRLCL 20 30 40 50 60 70 40 50 60 70 80 90 KIAA17 LLCWTLIEAVGSRAKKEAAAEEAKVGWGCPALRPEVPLTLRARAISLMASSGRKLWLRYP :::::::::::::::::::::::.::::::::::::: gi|114 LLCWTLIEAVGSRAKKEAAAEEARVGWGCPALRPEVP----------------------- 80 90 100 110 100 110 120 130 140 150 KIAA17 SFLPAAWICLLPGWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVAWGAGSRGARLRA gi|114 ------------------------------------------------------------ 160 170 180 190 200 210 KIAA17 VEPQGSCPSAAMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEA gi|114 ------------------------------------------------------------ 220 230 240 250 260 270 KIAA17 LELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYV :::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|114 ------ISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYI 120 130 140 150 160 280 290 300 310 320 330 KIAA17 NMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHS 170 180 190 200 210 220 340 350 360 370 380 390 KIAA17 MKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARV 230 240 250 260 270 280 400 410 420 430 440 450 KIAA17 CKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQ ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|114 CKGDMGGARTLQKKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQ 290 300 310 320 330 340 460 470 480 490 500 510 KIAA17 WGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGY 350 360 370 380 390 400 520 530 540 550 560 570 KIAA17 TSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLF 410 420 430 440 450 460 580 590 600 610 620 630 KIAA17 IGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADC 470 480 490 500 510 520 640 650 660 670 680 690 KIAA17 MKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRP 530 540 550 560 570 580 700 710 720 730 740 750 KIAA17 TPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPR 590 600 610 620 630 640 760 770 780 790 800 810 KIAA17 HAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLL 650 660 670 680 690 700 820 830 840 850 860 870 KIAA17 LLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSD 710 720 730 740 750 760 880 890 900 910 920 930 KIAA17 GSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRG 770 780 790 800 810 820 940 950 960 KIAA17 GLGHPLPELADELRRKLQQRQPLPDSNPEESSV ::::::::::::::::::::::::::::::::: gi|114 GLGHPLPELADELRRKLQQRQPLPDSNPEESSV 830 840 850 >>gi|194671303|ref|XP_604387.4| PREDICTED: similar to se (833 aa) initn: 5175 init1: 5175 opt: 5182 Z-score: 5414.5 bits: 1013.1 E(): 0 Smith-Waterman score: 5182; 90.385% identity (96.034% similar) in 832 aa overlap (133-963:8-833) 110 120 130 140 150 160 KIAA17 GWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA-WGAGSRGARLRAVEPQGSCPSAA : :.. :: : . . :. . :. gi|194 MAPHWAVWLLVLELWGLGLGAEVWWNLVPRKTVSSG- 10 20 30 170 180 190 200 210 220 KIAA17 MLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWEA :::::::::::::::::::::::: ::::::::::::::::.:::::::.::::: gi|194 -----ELATVVRRFSQTGIQDFLTLTLTEQTGLLYVGAREALFAFSVEALELQGVISWEA 40 50 60 70 80 90 230 240 250 260 270 280 KIAA17 PVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHGE :::::.:::::::.::::::::::::::::.:::::::::::::::::..:::::::..: gi|194 PVEKKAECIQKGKSNQTECFNFIRFLQPYNTSHLYVCGTYAFQPKCTYIDMLTFTLERSE 100 110 120 130 140 150 290 300 310 320 330 340 KIAA17 FEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWLN ::::::::::::::::.:::::::::::::::::::::.:::::::::.::::::::::: gi|194 FEDGKGKCPYDPAKGHTGLLVDGELYSATLNNFLGTEPVILRNMGPHHAMKTEYLAFWLN 160 170 180 190 200 210 350 360 370 380 390 400 KIAA17 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL ::::::::::::::::.::::::::::: ::::: ::::::::::::::::::.:::::: gi|194 EPHFVGSAYVPESVGSYTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTL 220 230 240 250 260 270 410 420 430 440 450 460 KIAA17 QRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAICE ::::::::::::.::::.::::::.:::.:::::.:::::::::::.:.:::: :::.:: gi|194 QRKWTTFLKARLVCSAPDWQLYFNRLQALHTLQDASWHNTTFFGVFRARWGDMDLSAVCE 280 290 300 310 320 330 470 480 490 500 510 520 KIAA17 YQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNIL :::::::.:::::::::::.:::: ::::::::::::::::::::::::::::::::::: gi|194 YQLEEIQKVFEGPYKEYHEQAQKWGRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNIL 340 350 360 370 380 390 530 540 550 560 570 580 KIAA17 NFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLKA ::.:::::::::: :::.:::::::..:.::::::::::::::::::::::::::::::: gi|194 NFIKKHPLMEEQVRPRWGRPLLVKKNANLTHLVADRVTGLDGATYTVLFIGTGDGWLLKA 400 410 420 430 440 450 590 600 610 620 630 640 KIAA17 VSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVL ::::::::::::::::::::..:::::.::::::::::::::::: :::::::::::::: gi|194 VSLGPWVHLIEELQLFDQEPVESLVLSRSKKLLFAGSRSQLVQLPPADCMKYRSCADCVL 460 470 480 490 500 510 650 660 670 680 690 700 KIAA17 ARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAGT ::::::::..:.:::::::::::::::::: .::::.:::.::::::: ::::::::::: gi|194 ARDPYCAWNANSSRCVAVGGHSGSLLIQHVTVSDTSSICNFRGSKKVRLTPKNITVVAGT 520 530 540 550 560 570 710 720 730 740 750 760 KIAA17 DLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSEE ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DLVLPCRLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSEE 580 590 600 610 620 630 770 780 790 800 810 820 KIAA17 QGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRLR 640 650 660 670 680 690 830 840 850 860 870 880 KIAA17 EELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHAR :::::::::.:::::::::::::::: :::: :: ::::::::::::::::::::::::: gi|194 EELEKGAKAAERTLVYPLELPKEPTSTPFRPGPETDEKLWDPVGYYYSDGSLKIVPGHAR 700 710 720 730 740 750 890 900 910 920 930 940 KIAA17 CQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELAD 760 770 780 790 800 810 950 960 KIAA17 ELRRKLQQRQPLPDSNPEESSV :::::::::::::::::::::: gi|194 ELRRKLQQRQPLPDSNPEESSV 820 830 >>gi|73970098|ref|XP_538464.2| PREDICTED: similar to Sem (849 aa) initn: 5164 init1: 5164 opt: 5174 Z-score: 5406.1 bits: 1011.5 E(): 0 Smith-Waterman score: 5174; 90.156% identity (95.798% similar) in 833 aa overlap (133-963:24-849) 110 120 130 140 150 160 KIAA17 GWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA-WGAGSRGARLR-AVEPQGSCPSA : : :. :: : ::.. . :. . :. gi|739 MRMMAAGLELRAEAFAMAPHWAVWLLAVGLWGLGI-GAEMWWNLVPRKTVSSG 10 20 30 40 50 170 180 190 200 210 220 KIAA17 AMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE :::::::::::.: :::::::::: :::::::::::::.::.:::::::::::: gi|739 ------ELATVVRRFSQSGTQDFLTLTLTEQTGLLYVGAREALFVFSVEALELQGAISWE 60 70 80 90 100 230 240 250 260 270 280 KIAA17 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG ::.:::.:::::::.::::::::::::::::.:::::::::::::::::..:::::::.: gi|739 APAEKKAECIQKGKSNQTECFNFIRFLQPYNTSHLYVCGTYAFQPKCTYIDMLTFTLERG 110 120 130 140 150 160 290 300 310 320 330 340 KIAA17 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL :::::::::::::::::.:::::::::::::::::::::.:::::::::::::::::::: gi|739 EFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNFLGTEPVILRNMGPHHSMKTEYLAFWL 170 180 190 200 210 220 350 360 370 380 390 400 KIAA17 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART ::::::::::.:::::::::::::::::: ::::: :::::::::::::::::::::::: gi|739 NEPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDMGGART 230 240 250 260 270 280 410 420 430 440 450 460 KIAA17 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC :::::::::::::.::::.::::::::::.::::..:::::::::::.:.:::. .::.: gi|739 LQRKWTTFLKARLVCSAPDWQLYFNQLQALHTLQEASWHNTTFFGVFRARWGDVDMSAVC 290 300 310 320 330 340 470 480 490 500 510 520 KIAA17 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI ::::::::::::::::::.:.:::: ::::::::::::::::::::::::::::::::: gi|739 EYQLEEIQRVFEGPYKEYREQAQKWGRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNT 350 360 370 380 390 400 530 540 550 560 570 580 KIAA17 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK :::.::::::::::::::.::::::: ::::::::::::::::::::::::::: ::::: gi|739 LNFIKKHPLMEEQVGPRWNRPLLVKKDTNFTHLVADRVTGLDGATYTVLFIGTGGGWLLK 410 420 430 440 450 460 590 600 610 620 630 640 KIAA17 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV ::::: :::::::::.:::::..:::::.:::::::::::::::::.:::.::::::::: gi|739 AVSLGSWVHLIEELQVFDQEPVESLVLSRSKKLLFAGSRSQLVQLPLADCVKYRSCADCV 470 480 490 500 510 520 650 660 670 680 690 700 KIAA17 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG ::::::::::::.:::.:::::::::::::: .:::::::::::.:::: ::::::::: gi|739 LARDPYCAWSVNASRCIAVGGHSGSLLIQHVAVSDTSGICNLRGNKKVRLIPKNITVVAG 530 540 550 560 570 580 710 720 730 740 750 760 KIAA17 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE :::::::.:::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|739 TDLVLPCRLSSNLAHARWTFGGRDLPAEQPGSFLYDPRLQALVVMAAQPRHAGAYHCFSE 590 600 610 620 630 640 770 780 790 800 810 820 KIAA17 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL 650 660 670 680 690 700 830 840 850 860 870 880 KIAA17 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA ::::::::::.::::::::::::::::::::: :: :::::::::::::::::::::::: gi|739 REELEKGAKAAERTLVYPLELPKEPTSPPFRPGPETDEKLWDPVGYYYSDGSLKIVPGHA 710 720 730 740 750 760 890 900 910 920 930 940 KIAA17 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RCQPGGAPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA 770 780 790 800 810 820 950 960 KIAA17 DELRRKLQQRQPLPDSNPEESSV ::::::::::::::::::::::: gi|739 DELRRKLQQRQPLPDSNPEESSV 830 840 >>gi|8134699|sp|Q64151.1|SEM4C_MOUSE RecName: Full=Semap (834 aa) initn: 4866 init1: 3032 opt: 4874 Z-score: 5092.6 bits: 953.5 E(): 0 Smith-Waterman score: 4874; 84.910% identity (93.533% similar) in 835 aa overlap (133-963:8-834) 110 120 130 140 150 KIAA17 GWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA--WGAGSRGARLR-AVEPQGSCPS : ::.: :: : ::.. . :. . : gi|813 MAPHWAVW-LLAAGLWGLGI-GAEMWWNLVPRKTVSS 10 20 30 160 170 180 190 200 210 KIAA17 AAMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISW . ::.::::::::::::::::::::: .:::::::::::::::.::::::::::: gi|813 G------ELVTVVRRFSQTGIQDFLTLTLTEHSGLLYVGAREALFAFSVEALELQGAISW 40 50 60 70 80 220 230 240 250 260 270 KIAA17 EAPVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEH :::.::: :: ::::.::::::::::::::::.:::::::::::::::::.:::::::.. gi|813 EAPAEKKIECTQKGKSNQTECFNFIRFLQPYNSSHLYVCGTYAFQPKCTYINMLTFTLDR 90 100 110 120 130 140 280 290 300 310 320 330 KIAA17 GEFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFW .:::::::::::::::::.:::::::::::::::::::::.::: :: :::.:::::::: gi|813 AEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNFLGTEPVILRYMGTHHSIKTEYLAFW 150 160 170 180 190 200 340 350 360 370 380 390 KIAA17 LNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGAR ::::::::::.::::::::::::::.:::: ::::: :::.::::::::::::::::::: gi|813 LNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYSEQVVARVARVCKGDMGGAR 210 220 230 240 250 260 400 410 420 430 440 450 KIAA17 TLQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAI :::.::::::::::.::::.:..:::::.:.:::. .:::::::::::::.:::: :::. gi|813 TLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLRGASWHNTTFFGVFQARWGDMDLSAV 270 280 290 300 310 320 460 470 480 490 500 510 KIAA17 CEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN ::::::.::.::::::::: :.:::: :::::::::::::::::::: .::::::::::: gi|813 CEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPSPRPGSCINNWHRDNGYTSSLELPDN 330 340 350 360 370 380 520 530 540 550 560 570 KIAA17 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLL :::.:::::::.:: :: .:::::::.:::::.::::: :::::::::::::::::::: gi|813 TLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVVADRVPGLDGATYTVLFIGTGDGWLL 390 400 410 420 430 440 580 590 600 610 620 630 KIAA17 KAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADC ::::::::.:..::::.:::::..:::::::::.:::::::::::: .::: ::: :.:: gi|813 KAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVLFAGSRSQLVQLSLADCTKYRFCVDC 450 460 470 480 490 500 640 650 660 670 680 690 KIAA17 VLARDPYCAWSVNTSRCVAV-GGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVV ::::::::::.::::::::. .:.:::.:.::: . ::: .:: : :::: ::::::: gi|813 VLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVANLDTSKMCNQYGIKKVRSIPKNITVV 510 520 530 540 550 560 700 710 720 730 740 750 KIAA17 AGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCF .:::::::::::::::::.::::..:::::::::::::. :::::::::: ::.: :.:. gi|813 SGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSFLYDTGLQALVVMAAQSRHSGPYRCY 570 580 590 600 610 620 760 770 780 790 800 810 KIAA17 SEEQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRR :::::.:::::.:::::::: ::::::::::::::::::::::::::::::::::::::: gi|813 SEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRR 630 640 650 660 670 680 820 830 840 850 860 870 KIAA17 RLREELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPG ::::::::::::.::::::::::::::.:::::: :: :::::::::::::::::::::: gi|813 RLREELEKGAKASERTLVYPLELPKEPASPPFRPGPETDEKLWDPVGYYYSDGSLKIVPG 690 700 710 720 730 740 880 890 900 910 920 930 KIAA17 HARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPE ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|813 HARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGSGHPLPE 750 760 770 780 790 800 940 950 960 KIAA17 LADELRRKLQQRQPLPDSNPEESSV ::::::::::::::::::::::::: gi|813 LADELRRKLQQRQPLPDSNPEESSV 810 820 830 >>gi|148682548|gb|EDL14495.1| mCG17761, isoform CRA_b [M (914 aa) initn: 4893 init1: 3032 opt: 4874 Z-score: 5092.1 bits: 953.5 E(): 0 Smith-Waterman score: 4879; 79.650% identity (88.403% similar) in 914 aa overlap (55-963:33-914) 30 40 50 60 70 80 KIAA17 HSRLCLLLCWTLIEAVGSRAKKEAAAEEAKVGWGCPALRPEVPLTLRAR-AISLMASSGR .: :: :: :. . : : : : : gi|148 PPPGPSLERRNPRPGVQVWGANPGPAPLHPLGCPCPLLREELGGWVTATPADSRSAPPGF 10 20 30 40 50 60 90 100 110 120 130 140 KIAA17 KLWLRYPSFLPAAWICLLPGWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA--WGA ::. :: . . : : :.:. : ::.: :: gi|148 D-----PSLGRAAGLKFRP-WVSAMAPHWAV------------------W-LLAAGLWGL 70 80 90 150 160 170 180 190 200 KIAA17 GSRGARLR-AVEPQGSCPSAAMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAR : ::.. . :. . :. ::.::::::::::::::::::::: .:::::::: gi|148 GI-GAEMWWNLVPRKTVSSG------ELVTVVRRFSQTGIQDFLTLTLTEHSGLLYVGAR 100 110 120 130 140 150 210 220 230 240 250 260 KIAA17 EALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGT :::::::.::::::::::::::.::: :: ::::.::::::::::::::::.:::::::: gi|148 EALFAFSVEALELQGAISWEAPAEKKIECTQKGKSNQTECFNFIRFLQPYNSSHLYVCGT 160 170 180 190 200 210 270 280 290 300 310 320 KIAA17 YAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPI :::::::::.:::::::...:::::::::::::::::.:::::::::::::::::::::. gi|148 YAFQPKCTYINMLTFTLDRAEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNFLGTEPV 220 230 240 250 260 270 330 340 350 360 370 380 KIAA17 ILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYA ::: :: :::.::::::::::::::::::.::::::::::::::.:::: ::::: :::. gi|148 ILRYMGTHHSIKTEYLAFWLNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYS 280 290 300 310 320 330 390 400 410 420 430 440 KIAA17 EQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHN ::::::::::::::::::::::.::::::::::.::::.:..:::::.:.:::. .:::: gi|148 EQVVARVARVCKGDMGGARTLQKKWTTFLKARLVCSAPDWKVYFNQLKAVHTLRGASWHN 340 350 360 370 380 390 450 460 470 480 490 500 KIAA17 TTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSC :::::::::.:::: :::.::::::.::.::::::::: :.:::: :::::::::::::: gi|148 TTFFGVFQARWGDMDLSAVCEYQLEQIQQVFEGPYKEYSEQAQKWARYTDPVPSPRPGSC 400 410 420 430 440 450 510 520 530 540 550 560 KIAA17 INNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTG :::::: .::::::::::: :::.:::::::.:: :: .:::::::.:::::.::::: : gi|148 INNWHRDNGYTSSLELPDNTLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVVADRVPG 460 470 480 490 500 510 570 580 590 600 610 620 KIAA17 LDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRS :::::::::::::::::::::::::::.:..::::.:::::..:::::::::.::::::: gi|148 LDGATYTVLFIGTGDGWLLKAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVLFAGSRS 520 530 540 550 560 570 630 640 650 660 670 KIAA17 QLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAV-GGHSGSLLIQHVMTSDTSGI ::::: .::: ::: :.::::::::::::.::::::::. .:.:::.:.::: . ::: . gi|148 QLVQLSLADCTKYRFCVDCVLARDPYCAWNVNTSRCVATTSGRSGSFLVQHVANLDTSKM 580 590 600 610 620 630 680 690 700 710 720 730 KIAA17 CNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARL :: : :::: :::::::.:::::::::::::::::.::::..:::::::::::::. : gi|148 CNQYGIKKVRSIPKNITVVSGTDLVLPCHLSSNLAHAHWTFGSQDLPAEQPGSFLYDTGL 640 650 660 670 680 690 740 750 760 770 780 790 KIAA17 QALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAV ::::::::: ::.: :.:.:::::.:::::.:::::::: :::::::::::::::::::: gi|148 QALVVMAAQSRHSGPYRCYSEEQGTRLAAESYLVAVVAGSSVTLEARAPLENLGLVWLAV 700 710 720 730 740 750 800 810 820 830 840 850 KIAA17 VALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEK :::::::::::::::::::::::::::::::.::::::::::::::.:::::: :: ::: gi|148 VALGAVCLVLLLLVLSLRRRLREELEKGAKASERTLVYPLELPKEPASPPFRPGPETDEK 760 770 780 790 800 810 860 870 880 890 900 910 KIAA17 LWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGY 820 830 840 850 860 870 920 930 940 950 960 KIAA17 VRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV :::::::::::: ::::::::::::::::::::::::::::::: gi|148 VRLQLGGEDRGGSGHPLPELADELRRKLQQRQPLPDSNPEESSV 880 890 900 910 >>gi|149046375|gb|EDL99268.1| sema domain, immunoglobuli (834 aa) initn: 4847 init1: 3143 opt: 4857 Z-score: 5074.8 bits: 950.2 E(): 0 Smith-Waterman score: 4857; 84.311% identity (93.174% similar) in 835 aa overlap (133-963:8-834) 110 120 130 140 150 KIAA17 GWERLGRPRWGCQGQRLFQKCPLLPIRGFGWHLLVA--WGAGSRGARLR-AVEPQGSCPS : ::.: :: : ::.. . :. . : gi|149 MAPHWAVW-LLAAGLWGLGI-GAEMWWNLAPRKTVSS 10 20 30 160 170 180 190 200 210 KIAA17 AAMLTPAELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISW . ::.::::::::::::::::::::. .:::::::::::::::.:::::::.::: gi|149 G------ELVTVVRRFSQTGIQDFLTLTLTDRSGLLYVGAREALFAFSVEALELQGVISW 40 50 60 70 80 220 230 240 250 260 270 KIAA17 EAPVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEH :::.::: :: ::::.::::::::::::::::::::::::::::::::::.:::::::.. gi|149 EAPAEKKIECTQKGKSNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYINMLTFTLDR 90 100 110 120 130 140 280 290 300 310 320 330 KIAA17 GEFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFW .:::::::::::::::::.:::::::::::::::::::::.::::::::: .:::::::: gi|149 AEFEDGKGKCPYDPAKGHTGLLVDGELYSATLNNFLGTEPVILRNMGPHHPIKTEYLAFW 150 160 170 180 190 200 340 350 360 370 380 390 KIAA17 LNEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGAR ::::::::::.::::::::::::::.:::: ::::: :::.::::::::::::::::::: gi|149 LNEPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYSEQVVARVARVCKGDMGGAR 210 220 230 240 250 260 400 410 420 430 440 450 KIAA17 TLQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAI :::.::::::::::.::::.:..:::::.:.::: .::::::::.::::.:::: :::. gi|149 TLQKKWTTFLKARLVCSAPDWKVYFNQLRAVHTLLGASWHNTTFFAVFQARWGDMDLSAV 270 280 290 300 310 320 460 470 480 490 500 510 KIAA17 CEYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN ::::::.::.:::::.::: :.:::: :::::::.:::::::::::: .::::::::::: gi|149 CEYQLEHIQQVFEGPFKEYSEQAQKWARYTDPVPTPRPGSCINNWHRDNGYTSSLELPDN 330 340 350 360 370 380 520 530 540 550 560 570 KIAA17 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLL :::.:::::::::: :: .:::::::.:::::.::::. :::::::::::::::::::: gi|149 TLNFIKKHPLMEEQVKPRLGRPLLVKKNTNFTHVVADRILGLDGATYTVLFIGTGDGWLL 390 400 410 420 430 440 580 590 600 610 620 630 KIAA17 KAVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADC ::::::::.:..::::.:::::..:::::::::.:::::::::::: .::: ::: :.:: gi|149 KAVSLGPWIHMVEELQVFDQEPVESLVLSQSKKVLFAGSRSQLVQLSLADCTKYRFCVDC 450 460 470 480 490 500 640 650 660 670 680 690 KIAA17 VLARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPT-PKNITVV ::::::::::.::::::::.::::::::.::: . : : .: . ::.::. ::::::: gi|149 VLARDPYCAWNVNTSRCVATGGHSGSLLVQHVANLDPSKMCIQYAIKKARPVVPKNITVV 510 520 530 540 550 560 700 710 720 730 740 750 KIAA17 AGTDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCF :::::::::::::::::: ::: :::::::::::::::. :::::::::: ::.: :::. gi|149 AGTDLVLPCHLSSNLAHALWTFRGRDLPAEQPGSFLYDTGLQALVVMAAQSRHSGPYHCY 570 580 590 600 610 620 760 770 780 790 800 810 KIAA17 SEEQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRR :::::..::::.:::.:::: ::::::::::::::::::::::::::::::::::::::: gi|149 SEEQGTKLAAESYLVSVVAGSSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRR 630 640 650 660 670 680 820 830 840 850 860 870 KIAA17 RLREELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPG :::::::::.::.::::::::::::::.:::::: :: :::::::::::::::::::::: gi|149 RLREELEKGSKAAERTLVYPLELPKEPASPPFRPGPETDEKLWDPVGYYYSDGSLKIVPG 690 700 710 720 730 740 880 890 900 910 920 930 KIAA17 HARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPE ::::::::::::::::::::::::::::::::::::::::::::::::::: : :::::: gi|149 HARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDREGSGHPLPE 750 760 770 780 790 800 940 950 960 KIAA17 LADELRRKLQQRQPLPDSNPEESSV .:::::::::::::::::::::::: gi|149 IADELRRKLQQRQPLPDSNPEESSV 810 820 830 963 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 15:11:38 2009 done: Thu Mar 5 15:15:06 2009 Total Scan time: 1674.950 Total Display time: 0.630 Function used was FASTA [version 34.26.5 April 26, 2007]